Evidence map›Paper›PMID 36437892›Full record

ArticleThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale2022

Epidemiology, Disease Severity and Outcome of Severe Acute Respiratory Syndrome Coronavirus 2 and Influenza Viruses Coinfection Seen at Egypt Integrated Acute Respiratory Infections Surveillance, 2020-2022.

Manal Fahim, Wael H Roshdy, Ola Deghedy, Reham Kamel, Amel Naguib, Shymaa Showky, Nancy Elguindy, Mohammad Abdel Fattah, Salma Afifi, Amira Mohsen and 2 more

Open access · goldAbstract read
In one paragraph

Article in The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 2 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 2 syntheses or guidelines pooled it, 10 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Manal FahimDepartment of Epidemiology and Surveillance, Preventive Sector, Ministry of Health and Population, 3 Magles El Shaab Street, Kasr Alainy, Cairo, Egypt.ORCID https://orcid.org/0000-0002-7206-4818
Wael H RoshdyCentral Public Health Laboratory, Ministry of Health and Population, Elsheikh Rehan Street, Cairo, Egypt.ORCID https://orcid.org/0000-0001-8412-3128
Ola DeghedyDepartment of Epidemiology and Surveillance, Preventive Sector, Ministry of Health and Population, 3 Magles El Shaab Street, Kasr Alainy, Cairo, Egypt.ORCID https://orcid.org/0000-0001-5022-5484
Reham KamelDepartment of Epidemiology and Surveillance, Preventive Sector, Ministry of Health and Population, 3 Magles El Shaab Street, Kasr Alainy, Cairo, Egypt.ORCID https://orcid.org/0000-0001-6973-2662
Amel NaguibCentral Public Health Laboratory, Ministry of Health and Population, Elsheikh Rehan Street, Cairo, Egypt.ORCID https://orcid.org/0000-0002-3384-2891
Shymaa ShowkyCentral Public Health Laboratory, Ministry of Health and Population, Elsheikh Rehan Street, Cairo, Egypt.ORCID https://orcid.org/0000-0002-0212-2437
Nancy ElguindyCentral Public Health Laboratory, Ministry of Health and Population, Elsheikh Rehan Street, Cairo, Egypt.ORCID https://orcid.org/0000-0002-5876-237X
Mohammad Abdel FattahPreventive Sector, Ministry of Health and Population, 3 Magles ElShaab Street, Kasr Alainy, Cairo, Egypt.ORCID https://orcid.org/0000-0001-9701-0333
Salma AfifiConsultant for Ministry of Health and Population, 3 Magles ElShaab Street, Kasr Alainy, Cairo, Egypt.ORCID https://orcid.org/0000-0001-7705-5999
Amira MohsenWorld Health Organization, Egypt Country Office, 3 Magles ElShaab Street, Kasr Alainy, Cairo, Egypt.ORCID https://orcid.org/0000-0003-4528-2243
Amr KandeelPreventive Sector, Ministry of Health and Population, 3 Magles ElShaab Street, Kasr Alainy, Cairo, Egypt.ORCID https://orcid.org/0000-0003-4358-7182
Khaled AbdelghaffarMinistry of Health and Population, 3 Magles ElShaab Street, Kasr Alainy, Cairo, Egypt.ORCID https://orcid.org/0000-0002-3128-0557
Ministry of Health and Population · EGWorld Health Organization - Egypt · EG

Funding

World Health Organization 001
6 · The paper itself

Abstract

Background: Cocirculation of influenza (Flu) and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) (SARS-CoV-2/Flu) represent a public health concern as it may worsen the severity and increase fatality from coronavirus disease 2019. An increase in the number of patients with coinfection was recently reported. We studied epidemiology, severity, and outcome of patients with SARS-CoV-2/Flu coinfection seen at Egypt's integrated acute respiratory infections surveillance to better describe disease impact and guide effective preventive measures. Methods: The first two outpatients were seen daily, and every fifth patient admitted to 19 sentinel hospitals with respiratory symptoms was enrolled. Patients were interviewed using a standardized questionnaire and provided nasopharyngeal swabs to be tested for SARS-CoV-2 and influenza by real-time polymerase chain reaction at the central laboratory. Data from all patients with coinfection were obtained, and descriptive data analysis was performed for patients' demographics, clinical course, and outcome. Results: The total number of patients enrolled between January 2020 and April 2022 was 18,160 and 6,453 (35.5%) tested positive for viruses, including 52 (0.8%) coinfection. Of them, 36 (69.2%) were coinfected with Flu A/H3, 9 (17.3%) Flu-B, and 7 (13.5%) Flu A/H1. Patients' mean age was 33.2 ± 21, 55.8% were males, and 20 (38.5%) were hospitalized, with mean hospital days 6.7 ± 6. At the hospital, 14 (70.0%) developed pneumonia, 6 (30.0%) ICU admitted, and 4 (20.0%) died. The hospitalization rate among patients coinfected with Flu-B and Flu A/H3 was 55.6 and 41.7%, with mean hospital days (8.0 ± 6 and 6.4 ± 6), pneumonia infection (40.0 and 80.0%), ICU admission (40.0 and 26.7%), and death (20.0% for both), while no patients hospitalized with A/H1. Conclusions: The recent increase in the number of SARS-CoV-2/Flu coinfections was identified in Egypt. The disease could have a severe course and high fatality, especially in those coinfected with Flu-B and Flu A/H3. Monitoring disease severity and impact is required to guide preventive strategy.

Identifiers

PMID36437892
PMCPMC9691288
OpenAlexW4309618444

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.