Evidence map›Paper›PMID 36435874›Full record

ArticleNature communications2022

Decoding molecular programs in melanoma brain metastases.

Josefine Radke, Elisa Schumann, Julia Onken, Randi Koll, Güliz Acker, Bohdan Bodnar, Carolin Senger, Sascha Tierling, Markus Möbs, Peter Vajkoczy and 10 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

  1. Focused ultrasound for brain metastases.Neuro-oncology advances · 2026
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  3. Cells · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 6 institutions in 2 countries.

Josefine Radke *Department of Pathology, University Medicine Greifswald, Greifswald, Germany. josefine.radke@med.uni-greifswald.de.ORCID 0000-0001-9860-2007
Elisa Schumann *German Cancer Consortium (DKTK), Partner Site Berlin, CCCC (Campus Mitte), Berlin, Germany.
Julia OnkenGerman Cancer Consortium (DKTK), Partner Site Berlin, CCCC (Campus Mitte), Berlin, Germany.
Randi KollGerman Cancer Consortium (DKTK), Partner Site Berlin, CCCC (Campus Mitte), Berlin, Germany.
Güliz AckerBerlin Institute of Health (BIH), Berlin, Germany.
Bohdan BodnarDepartment of Neurosurgery, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin and Berlin Institute of Health, Berlin, Germany.
Carolin SengerCharité CyberKnife Center, Department of Radiation Oncology, Charité Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin and Berlin Institute of Health, Berlin, Germany.
Sascha TierlingDepartment of Genetics/Epigenetics, Faculty NT, Saarland University, Saarbrücken, Germany.
Markus MöbsDepartment of Pathology, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin and Berlin Institute of Health, Berlin, Germany.ORCID 0000-0002-1502-3032
Peter VajkoczyDepartment of Neurosurgery, Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin and Berlin Institute of Health, Berlin, Germany.
Anna VidalInstitute for Medical Biochemistry, University of Veterinary Medicine Vienna, Vienna, Austria.ORCID 0000-0001-6172-0130
Sandra HöglerInstitute of Pathology, Unit of Laboratory Animal Pathology, University of Veterinary Medicine Vienna, Vienna, Austria.
Petra KodajovaInstitute of Pathology, Unit of Laboratory Animal Pathology, University of Veterinary Medicine Vienna, Vienna, Austria.
Dana WestphalDepartment of Dermatology, University Hospital Carl Gustav Carus at TU Dresden, Dresden, Germany.
Friedegund MeierDepartment of Dermatology, University Hospital Carl Gustav Carus at TU Dresden, Dresden, Germany.
Frank HeppnerBerlin Institute of Health (BIH), Berlin, Germany.ORCID 0000-0001-9816-8917
Susanne Kreuzer-RedmerNutrigenomics Unit, Institute of Animal Nutrition and Functional Plant Compounds, University of Veterinary Medicine Vienna, Vienna, Austria.
Florian GrebienInstitute for Medical Biochemistry, University of Veterinary Medicine Vienna, Vienna, Austria.ORCID 0000-0003-4289-2281
Karsten JürchottBerlin Institute of Health at Charité - Universitätsmedizin Berlin, Center for Regenerative Therapies (BCRT), Berlin, Germany.
Torben RedmerInstitute for Medical Biochemistry, University of Veterinary Medicine Vienna, Vienna, Austria. torben.redmer@vetmeduni.ac.at.ORCID 0000-0002-0050-9478
Humboldt-Universität zu Berlin · DEUniversity of Veterinary Medicine Vienna · ATGerman Cancer Research Center · DEBerlin Institute of Health at Charité - Universitätsmedizin Berlin · DESaarland University · DEUniversitätsmedizin Greifswald · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Melanoma brain metastases (MBM) variably respond to therapeutic interventions; thus determining patient's prognosis. However, the mechanisms that govern therapy response are poorly understood. Here, we use a multi-OMICS approach and targeted sequencing (TargetSeq) to unravel the programs that potentially control the development of progressive intracranial disease. Molecularly, the expression of E-cadherin (Ecad) or NGFR, the BRAF mutation state and level of immune cell infiltration subdivides tumors into proliferative/pigmented and invasive/stem-like/therapy-resistant irrespective of the intracranial location. The analysis of MAPK inhibitor-naive and refractory MBM reveals switching from Ecad-associated into NGFR-associated programs during progression. NGFR-associated programs control cell migration and proliferation via downstream transcription factors such as SOX4. Moreover, global methylome profiling uncovers 46 differentially methylated regions that discriminate BRAF

Indexed as

Brain NeoplasmsMelanomaHumansMutationProto-Oncogene Proteins B-rafSOXC Transcription FactorsProto-Oncogene Proteins B-rafSOX4 protein, humanSOXC Transcription Factors

Identifiers

PMID36435874
PMCPMC9701224
OpenAlexW4310009723

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.