Evidence map›Paper›PMID 36434693›Full record

ArticleBMC urology2022

CircRNA/miRNA/mRNA axis participates in the progression of partial bladder outlet obstruction.

Baoyi Zhu, Jun Gao, Yuying Zhang, Baojian Liao, Sihua Zhu, Chunling Li, Junhao Liao, Jianjia Liu, Chonghe Jiang, Jianwen Zeng

Open access · goldAbstract read
In one paragraph

Article in BMC urology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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  5. Article
  6. Construction of a potentially functional long noncoding RNA-microRNA-mRNA network in diabetic cardiomyopathy.Journal of research in medical sciences : the official journal of Isfahan University of Medical Sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Baoyi Zhu *Department of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University (Qingyuan People's Hospital), B24 Yinquan Road, Qingcheng, Qingyuan, 511500, Guangdong, People's Republic of China.
Jun Gao *Department of Basic Medical Research, The Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan, 511518, Guangdong, People's Republic of China.
Yuying Zhang *Department of Child Health Care, Shenzhen Longhua Maternity and Child Health Care Hospital, Shenzhen, 518000, Guangdong, People's Republic of China.
Baojian LiaoDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University (Qingyuan People's Hospital), B24 Yinquan Road, Qingcheng, Qingyuan, 511500, Guangdong, People's Republic of China.
Sihua ZhuDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University (Qingyuan People's Hospital), B24 Yinquan Road, Qingcheng, Qingyuan, 511500, Guangdong, People's Republic of China.
Chunling LiDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University (Qingyuan People's Hospital), B24 Yinquan Road, Qingcheng, Qingyuan, 511500, Guangdong, People's Republic of China.
Junhao LiaoDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University (Qingyuan People's Hospital), B24 Yinquan Road, Qingcheng, Qingyuan, 511500, Guangdong, People's Republic of China.
Jianjia LiuDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University (Qingyuan People's Hospital), B24 Yinquan Road, Qingcheng, Qingyuan, 511500, Guangdong, People's Republic of China.
Chonghe JiangDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University (Qingyuan People's Hospital), B24 Yinquan Road, Qingcheng, Qingyuan, 511500, Guangdong, People's Republic of China.
Jianwen ZengDepartment of Urology, The Sixth Affiliated Hospital of Guangzhou Medical University (Qingyuan People's Hospital), B24 Yinquan Road, Qingcheng, Qingyuan, 511500, Guangdong, People's Republic of China. zengjwen@gzhmu.edu.cn.
Guangzhou Medical University · CNGuangzhou Institutes of Biomedicine and Health · CNShenzhen Maternity and Child Healthcare Hospital · CN

Funding

Chinese Postdoctoral Science Foundation 2020M672593the grants from the National Natural Science Foundation of China 81802551the grants from the National Natural Science Foundation of China 81900688the Medical Research Foundation of Guangdong Province A2019473the Medical Research Foundation of Guangdong Province B2020011the Medical Research Foundation of Qingyuan People's Hospital 20190205the Natural Science Foundation of Guangdong Province 2016A030307033the Natural Science Foundation of Guangdong Province 2019A1515011107the Science and Technology Foundation of Qingyuan City 2020KJJH009
6 · The paper itself

Abstract

backgroundMore and more evidence showed that circRNA/miRNA/mRNA axis played a vital role in the pathogenesis of some diseases. However, the role of circRNA/miRNA/mRNA axis in partial bladder outlet obstruction (pBOO) remains unknown. Our study aimed to explore the complex regulatory mechanism of circRNA/miRNA/mRNA axis in pBOO.

methodsThe pBOO rat model was established, and the bladder tissues were collected for mRNA sequencing. The differentially expressed mRNAs were analyzed by high-throughput sequencing, and the GO and KEGG analysis of the differentially expressed mRNAs were performed. Competing endogenous RNAs (ceRNAs) analysis identified the potential regulation function of circRNA/miRNA/mRNA axis in pBOO. qRT-PCR detected the expression of circRNA/miRNA/mRNA. miRanda software was performed to predict the relationship between circRNA and miRNA, miRNA and mRNA.

resultsCompared with the sham group, a total of 571 mRNAs were differentially expressed in the pBOO group, of which 286 were up-regulated and 285 were down-regulated. GO analysis showed that the mRNAs were mainly involved in cellular process, single-organism process, and cell, etc. KEGG analysis showed that the enriched signaling pathways were metabolic pathways, cell adhesion molecules (CAMs), and HTLV-I infection, etc. Based on the previous transcriptome data and differentially expressed circRNAs, we drew the ceRNA network regulation diagram. qRT-PCR results confirmed that chr3:113195876|113197193/rno-miR-30c-1-3p/Gata4, chr1:126188351|126195625/rno-miR-153-5p/Diaph3, and chr9:81258380|81275269/rno-miR-135b-5p/Pigr axis may have ceRNA function. miRanda confirmed there have the binding sites of circRNA/miRNA/mRNA axis.

conclusionsCircRNA/miRNA/mRNA axis was involved in the progression of pBOO. Our research on the circRNA/miRNA/mRNA axis revealed new pathogenesis and treatment strategies for pBOO.

Indexed as

MicroRNAsUrinary Bladder Neck ObstructionAnimalsRatsRNA, CircularRNA, MessengerTranscriptomeMicroRNAsMIRN153 microRNA, ratRNA, CircularRNA, MessengerBladder outlet obstructionceRNAcircRNA/miRNA/mRNAmRNA sequencing

Identifiers

PMID36434693
PMCPMC9700926
OpenAlexW4310052648

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.