Evidence map›Paper›PMID 36433995›Full record

ArticleNature communications2022

Gating and ion selectivity of Channelrhodopsins are critical for photo-activated orientation of Chlamydomonas as shown by in vivo point mutation.

Olga Baidukova, Johannes Oppermann, Simon Kelterborn, Rodrigo G Fernandez Lahore, Dimitri Schumacher, Heide Evers, Yousef Yari Kamrani, Peter Hegemann

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 23 citations in OpenAlex.

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  6. Potassium-selective channelrhodopsins.Biophysics and physicobiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Olga BaidukovaInstitute of Biology, Experimental Biophysics, Humboldt University of Berlin, Berlin, Germany. baidukol@hu-berlin.de.ORCID 0000-0002-8805-1202
Johannes OppermannInstitute of Biology, Experimental Biophysics, Humboldt University of Berlin, Berlin, Germany.ORCID 0000-0002-3442-1458
Simon KelterbornInstitute of Biology, Experimental Biophysics, Humboldt University of Berlin, Berlin, Germany.ORCID 0000-0002-4881-739X
Rodrigo G Fernandez LahoreInstitute of Biology, Experimental Biophysics, Humboldt University of Berlin, Berlin, Germany.ORCID 0000-0002-8559-2767
Dimitri SchumacherInstitute of Biology, Experimental Biophysics, Humboldt University of Berlin, Berlin, Germany.ORCID 0000-0001-5326-8324
Heide EversInstitute of Biology, Experimental Biophysics, Humboldt University of Berlin, Berlin, Germany.
Yousef Yari KamraniInstitute of Biology, Experimental Biophysics, Humboldt University of Berlin, Berlin, Germany.
Peter HegemannInstitute of Biology, Experimental Biophysics, Humboldt University of Berlin, Berlin, Germany.ORCID 0000-0003-3589-6452
Humboldt-Universität zu Berlin · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The green unicellular alga Chlamydomonas reinhardtii with two photoreceptors called channelrhodopsins is a model organism that gave birth to a new scientific field of biomedical studies, optogenetics. Although channelrhodopsins are helping to decipher the activity of the human brain, their functionality has never been extensively studied in the organism of origin, mainly due to the difficulties connected to reverse genetic interventions. In this study, we present a CRISPR-Cas9-based technique that enables a precise in vivo exchange of single amino acids in a selected gene. To shed light on the function of channelrhodopsins ChR1 (C1) and ChR2 (C2) in vivo, we deleted both channelrhodopsins independently in the wild-type strain and introduced point mutations in the remaining channel, causing modified photocycle kinetics and ion selectivity. The mutated strains, ΔC1C2-E123T, ΔC1C2-E90R and ΔC1C2-E90Q, showed about 100-fold decrease in photosensitivity, a reduced photophobic response and faster light adaptation rates due to accelerated photocycle kinetics and reduced Ca

Indexed as

ChlamydomonasChlamydomonas reinhardtiiChannelrhodopsinsHumansIonsPoint MutationChannelrhodopsinsIons

Identifiers

PMID36433995
PMCPMC9700795
OpenAlexW4309961595

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.