Evidence map›Paper›PMID 36432890›Full record

ArticlePlants (Basel, Switzerland)2022

Combined Approach of GWAS and Phylogenetic Analyses to Identify New Candidate Genes That Participate in

Brenda Anabel López-Ruiz, Elsa H Quezada-Rodríguez, Alma Piñeyro-Nelson, Hugo Tovar, Berenice García-Ponce, María de la Paz Sánchez, Elena R Álvarez-Buylla, Adriana Garay-Arroyo

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it, 6 citations in OpenAlex.

  1. Pooled it
  2. Mapping Quantitative Trait Loci inPlants (Basel, Switzerland) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Brenda Anabel López-RuizLaboratorio de Genética Molecular, Desarrollo y Evolución de Plantas, Departamento de Ecología Funcional, Instituto de Ecología, Universidad Nacional Autónoma de México, Ciudad de México 04510, Mexico.
Elsa H Quezada-RodríguezDepartamento de Producción Agrícola y Animal, Universidad Autónoma Metropolitana-Xochimilco, Ciudad de México 04510, Mexico.ORCID 0000-0001-7789-4987
Alma Piñeyro-NelsonDepartamento de Producción Agrícola y Animal, Universidad Autónoma Metropolitana-Xochimilco, Ciudad de México 04510, Mexico.ORCID 0000-0001-7349-0096
Hugo TovarDivisión de Genómica Computacional, Instituto Nacional de Medicina Genómica (INMEGEN), Ciudad de México 14610, Mexico.ORCID 0000-0002-8360-6133
Berenice García-PonceLaboratorio de Genética Molecular, Desarrollo y Evolución de Plantas, Departamento de Ecología Funcional, Instituto de Ecología, Universidad Nacional Autónoma de México, Ciudad de México 04510, Mexico.ORCID 0000-0002-7312-0754
María de la Paz SánchezLaboratorio de Genética Molecular, Desarrollo y Evolución de Plantas, Departamento de Ecología Funcional, Instituto de Ecología, Universidad Nacional Autónoma de México, Ciudad de México 04510, Mexico.
Elena R Álvarez-BuyllaLaboratorio de Genética Molecular, Desarrollo y Evolución de Plantas, Departamento de Ecología Funcional, Instituto de Ecología, Universidad Nacional Autónoma de México, Ciudad de México 04510, Mexico.
Adriana Garay-ArroyoLaboratorio de Genética Molecular, Desarrollo y Evolución de Plantas, Departamento de Ecología Funcional, Instituto de Ecología, Universidad Nacional Autónoma de México, Ciudad de México 04510, Mexico.ORCID 0000-0003-1575-6284
Instituto de Ecología · MXUniversidad Autónoma de la Ciudad de México · MXNational Institute of Genomic Medicine · MXUniversidad Autónoma Metropolitana · MX

Funding

Consejo Nacional de Ciencia y Tecnología 102959, 102987UNAM-DGAPA-PAPIIT IN200920, IN203220, IN206220, IN208517
6 · The paper itself

Abstract

Genome-wide association studies (GWAS) have allowed the identification of different loci associated with primary root (PR) growth, and Arabidopsis is an excellent model for these studies. The PR length is controlled by cell proliferation, elongation, and differentiation; however, the specific contribution of proliferation and differentiation in the control of PR growth is still poorly studied. To this end, we analyzed 124 accessions and used a GWAS approach to identify potential causal genomic regions related to four traits: PR length, growth rate, cell proliferation and cell differentiation. Twenty-three genes and five statistically significant SNPs were identified. The SNP with the highest score mapped to the fifth exon of

Indexed as

accessionsArabidopsis thalianaelongation zoneGWASmeristem zoneprimary root growth

Identifiers

PMID36432890
PMCPMC9697774
OpenAlexW4309708687

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.