Evidence map›Paper›PMID 36430535›Full record

ArticleInternational journal of molecular sciences2022

The SARS-CoV-2 Delta-Omicron Recombinant Lineage (XD) Exhibits Immune-Escape Properties Similar to the Omicron (BA.1) Variant.

Prerna Arora, Lu Zhang, Cheila Rocha, Luise Graichen, Inga Nehlmeier, Amy Kempf, Anne Cossmann, Gema Morillas Ramos, Eva Baier, Björn Tampe and 6 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Prerna AroraInfection Biology Unit, German Primate Center-Leibniz Institute for Primate Research, Kellnerweg 4, 37077 Göttingen, Germany.ORCID 0000-0002-0618-8652
Lu ZhangInfection Biology Unit, German Primate Center-Leibniz Institute for Primate Research, Kellnerweg 4, 37077 Göttingen, Germany.
Cheila RochaInfection Biology Unit, German Primate Center-Leibniz Institute for Primate Research, Kellnerweg 4, 37077 Göttingen, Germany.ORCID 0000-0002-0148-9405
Luise GraichenInfection Biology Unit, German Primate Center-Leibniz Institute for Primate Research, Kellnerweg 4, 37077 Göttingen, Germany.
Inga NehlmeierInfection Biology Unit, German Primate Center-Leibniz Institute for Primate Research, Kellnerweg 4, 37077 Göttingen, Germany.
Amy KempfInfection Biology Unit, German Primate Center-Leibniz Institute for Primate Research, Kellnerweg 4, 37077 Göttingen, Germany.
Anne CossmannDepartment for Rheumatology and Immunology, Hannover Medical School, Carl-Neuberg-Straße 1, 30625 Hannover, Germany.
Gema Morillas RamosDepartment for Rheumatology and Immunology, Hannover Medical School, Carl-Neuberg-Straße 1, 30625 Hannover, Germany.
Eva BaierDepartment of Nephrology and Rheumatology, University Medical Center Göttingen, Georg-August University of Göttingen, Robert-Koch-Straße 40, 37075 Göttingen, Germany.ORCID 0000-0001-9055-1364
Björn TampeDepartment of Nephrology and Rheumatology, University Medical Center Göttingen, Georg-August University of Göttingen, Robert-Koch-Straße 40, 37075 Göttingen, Germany.ORCID 0000-0002-4357-9863
Onnen MoererDepartment of Anesthesiology, University Medical Center Göttingen, Georg-August University of Göttingen, Robert-Koch-Straße 40, 37075 Göttingen, Germany.ORCID 0000-0002-4210-388X
Steffen DickelDepartment of Anesthesiology, University Medical Center Göttingen, Georg-August University of Göttingen, Robert-Koch-Straße 40, 37075 Göttingen, Germany.ORCID 0000-0002-1404-785X
Martin S WinklerDepartment of Anesthesiology, University Medical Center Göttingen, Georg-August University of Göttingen, Robert-Koch-Straße 40, 37075 Göttingen, Germany.
Georg M N BehrensDepartment for Rheumatology and Immunology, Hannover Medical School, Carl-Neuberg-Straße 1, 30625 Hannover, Germany.ORCID 0000-0003-3111-621X
Stefan PöhlmannInfection Biology Unit, German Primate Center-Leibniz Institute for Primate Research, Kellnerweg 4, 37077 Göttingen, Germany.ORCID 0000-0001-6086-9136
Markus HoffmannInfection Biology Unit, German Primate Center-Leibniz Institute for Primate Research, Kellnerweg 4, 37077 Göttingen, Germany.ORCID 0000-0003-4603-7696
German Primate Center · DEUniversitätsmedizin Göttingen · DEMedizinische Hochschule Hannover · DE

Funding

Deutsche Forschungsgemeinschaft PO 716/11-1Deutsche Forschungsgemeinschaft PO 716/14-1European Commission EU UNDINE project, grant number 101057100European Regional Development Fund Defeat Corona: ZW7-8515131Federal Ministry of Education and Research 01KI2006DFederal Ministry of Education and Research 01KI20328AFederal Ministry of Education and Research 01KX2021German Center for Infection Research 80018019238Ministry for Science and Culture of Lower Saxony 14-76103-184Ministry for Science and Culture of Lower Saxony MWK HZI COVID-19Sartorius AG n.a.
6 · The paper itself

Abstract

Recently, a recombinant SARS-CoV-2 lineage, XD, emerged that harbors a spike gene that is largely derived from the Omicron variant BA.1 in the genetic background of the Delta variant. This finding raised concerns that the recombinant virus might exhibit altered biological properties as compared to the parental viruses and might pose an elevated threat to human health. Here, using pseudotyped particles, we show that ACE2 binding and cell tropism of XD mimics that of BA.1. Further, XD and BA.1 displayed comparable sensitivity to neutralization by antibodies induced upon vaccination with BNT162b2/Comirnaty (BNT) or BNT vaccination followed by breakthrough infection. Our findings reveal important biological commonalities between XD and Omicron BA.1 host cell entry and its inhibition by antibodies.

Indexed as

COVID-19Spike Glycoprotein, CoronavirusBNT162 VaccineHumansMembrane GlycoproteinsSARS-CoV-2Viral Envelope ProteinsBNT162 VaccineMembrane GlycoproteinsSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2Viral Envelope Proteinsantibody evasionBA.1deltacrondelta-omicrondelta variantneutralizationomicron variantrecombinantSARS-CoV-2spike protein

Identifiers

PMID36430535
PMCPMC9696394
OpenAlexW4309027175

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.