Evidence map›Paper›PMID 36429098›Full record

ArticleCells2022

Comprehensive Analysis of the Prognostic Value and Molecular Function of CRNDE in Glioma at Bulk and Single-Cell Levels.

Lairong Song, Xiaojie Li, Xiaoying Xu, Xulei Huo, Yi Zheng, Xiaomin Wang, Da Li, Junting Zhang, Ke Wang, Liang Wang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Lairong SongDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100071, China.ORCID 0000-0003-1069-9946
Xiaojie LiDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100071, China.
Xiaoying XuDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100071, China.
Xulei HuoDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100071, China.
Yi ZhengDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100071, China.
Xiaomin WangKey Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Department of Lymphoma, Peking University Cancer Hospital & Institute, Beijing 100089, China.
Da LiDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100071, China.
Junting ZhangDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100071, China.ORCID 0000-0003-3763-1095
Ke WangDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100071, China.
Liang WangDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100071, China.
Zhen WuDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100071, China.
Capital Medical University · CNPeking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colorectal neoplasia differentially expressed (CRNDE) is an oncogenic long noncoding RNA (lncRNA) overexpressed in diverse malignancies. Here, we comprehensively analyze the prognostic value and molecular function of CRNDE in glioma. Bulk RNA-sequencing data from The Cancer Genome Atlas (TCGA) and Chinese Glioma Genome Atlas (CGGA), and single-cell RNA-sequencing data from the Tumor Immune Single-Cell Hub (TISCH) were analyzed. Kaplan-Meier survival analysis was applied to verify the prognostic value of CRNDE. Then, a nomogram based on multivariate Cox regression was established for individualized survival prediction. Subsequently, the expression characteristic and biological function of CRNDE were analyzed at the single-cell level. Lastly, the effects of CRNDE on the proliferation and invasion of glioma cell were explored in vitro. We discovered that CRNDE was a powerful marker for risk stratification of glioma patients. Regardless of the status of IDH and 1p/19q, CRNDE could effectively stratify patients' prognosis. The nomogram that incorporated the CRNDE expression was proved to be a reliable tool for survival prediction. In addition, epithelial-mesenchymal transition may be the most important biological process regulated by CRNDE, which was identified at both the bulk and single-cell levels. Moreover, CRNDE knockdown significantly inhibited the proliferation and invasion of glioma cell. Overall, CRNDE is a vital oncogene and may be a valuable supplement to improve the clinical stratification of glioma.

Indexed as

Colorectal NeoplasmsGliomaRNA, Long NoncodingCell Line, TumorCell MovementCell ProliferationGene Expression Regulation, NeoplasticHumansPrognosisRNA, Long NoncodingCRNDEepithelial–mesenchymal transitiongliomaprognostic modelsingle-cell RNA sequencing

Identifiers

PMID36429098
PMCPMC9688829
OpenAlexW4309543412

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.