Evidence map›Paper›PMID 36428885›Full record

ArticleDiagnostics (Basel, Switzerland)2022

Strategies for Enhancing the Multi-Stage Classification Performances of HER2 Breast Cancer from Hematoxylin and Eosin Images.

Md Sakib Hossain Shovon, Md Jahidul Islam, Mohammed Nawshar Ali Khan Nabil, Md Mohimen Molla, Akinul Islam Jony, M F Mridha

Open access · goldAbstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Md Sakib Hossain ShovonDepartment of Computer Science, American International University-Bangladesh, Dhaka 1229, Bangladesh.ORCID 0000-0002-5013-8556
Md Jahidul IslamDepartment of Computer Science, American International University-Bangladesh, Dhaka 1229, Bangladesh.
Mohammed Nawshar Ali Khan NabilDepartment of Computer Science, American International University-Bangladesh, Dhaka 1229, Bangladesh.
Md Mohimen MollaDepartment of Computer Science, American International University-Bangladesh, Dhaka 1229, Bangladesh.ORCID 0000-0002-3552-2656
Akinul Islam JonyDepartment of Computer Science, American International University-Bangladesh, Dhaka 1229, Bangladesh.ORCID 0000-0002-2942-6780
M F MridhaDepartment of Computer Science, American International University-Bangladesh, Dhaka 1229, Bangladesh.ORCID 0000-0001-5738-1631
American International University-Bangladesh · BD

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Breast cancer is a significant health concern among women. Prompt diagnosis can diminish the mortality rate and direct patients to take steps for cancer treatment. Recently, deep learning has been employed to diagnose breast cancer in the context of digital pathology. To help in this area, a transfer learning-based model called 'HE-HER2Net' has been proposed to diagnose multiple stages of HER2 breast cancer (HER2-0, HER2-1+, HER2-2+, HER2-3+) on H&E (hematoxylin & eosin) images from the BCI dataset. HE-HER2Net is the modified version of the Xception model, which is additionally comprised of global average pooling, several batch normalization layers, dropout layers, and dense layers with a swish activation function. This proposed model exceeds all existing models in terms of accuracy (0.87), precision (0.88), recall (0.86), and AUC score (0.98) immensely. In addition, our proposed model has been explained through a class-discriminative localization technique using Grad-CAM to build trust and to make the model more transparent. Finally, nuclei segmentation has been performed through the StarDist method.

Indexed as

breast cancerGrad-CAMHER2modified Xceptionmulti-stagenuclei segmentationStarDist

Identifiers

PMID36428885
PMCPMC9689487
OpenAlexW4309740557

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.