Evidence map›Paper›PMID 36426934›Full record

ArticleParasite (Paris, France)2022

Evaluation of the Bio-Evolution Microsporidia generic and typing real-time PCR assays for the diagnosis of intestinal microsporidiosis.

Maxime Moniot, Céline Nourrisson, Virginie Bonnin, Céline Damiani, Nicolas Argy, Julie Bonhomme, Emilie Fréalle, Cécile Angebault, Anne Debourgogne, Emilie Sitterlé and 6 more

Open access · goldAbstract read
In one paragraph

Article in Parasite (Paris, France), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Emerging microbes & infections · 2024
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 12 institutions in 1 country.

Maxime MoniotLaboratoire de Parasitologie-Mycologie, CHU Clermont-Ferrand, 3IHP, 63003 Clermont-Ferrand, France.ORCID 0000-0002-1471-6945
Céline NourrissonLaboratoire de Parasitologie-Mycologie, CHU Clermont-Ferrand, 3IHP, 63003 Clermont-Ferrand, France - Microbes, Intestin, Inflammation et Susceptibilité de l'Hôte (M2iSH), UMR Inserm/Université Clermont Auvergne U1071, USC INRA 2018, 63000 Clermont-Ferrand, France.ORCID 0000-0002-4003-805X
Virginie BonninMicrobes, Intestin, Inflammation et Susceptibilité de l'Hôte (M2iSH), UMR Inserm/Université Clermont Auvergne U1071, USC INRA 2018, 63000 Clermont-Ferrand, France.
Céline DamianiLaboratoire de Parasitologie et Mycologie Médicales, CBH, CHU Amiens Picardie; Equipe Agents Infectieux, Résistance et Chimiothérapie (AGIR) UR4294, Université de Picardie Jules Verne, 80480 Amiens, France.
Nicolas ArgyService de Parasitologie Mycologie, CHU Bichat-Claude-Bernard, Assistance Publique des Hôpitaux de Paris (APHP); IRD UMR MERIT 261, Faculté de Pharmacie, Université de Paris Cité, 75018 Paris, France.ORCID 0000-0002-0458-2664
Julie BonhommeService de Microbiologie, CHU Caen, ToxEMAC-ABTE, Normandie Univ, Unicaen & Unirouen, 14033 Caen, France.ORCID 0000-0002-6635-6232
Emilie FréalleLaboratoire de Parasitologie et Mycologie Médicale, CHU Lille, 59037 Lille, France.ORCID 0000-0003-3129-979X
Cécile AngebaultUnité de Parasitologie-Mycologie, Département de Prévention, Diagnostic et Traitement des Infections, CHU Henri Mondor, AP-HP; EA DYNAMiC 7380, Faculté de Santé, Univ Paris-Est Créteil, 94000 Créteil, France.ORCID 0000-0001-7641-3002
Anne DebourgogneLaboratoire de Microbiologie, CHU Nancy, 54035 Nancy, France.
Emilie SitterléUnité de Parasitologie-Mycologie, Service de Microbiologie clinique, GHU Necker-Enfants-Malades, Assistance Publique des Hôpitaux de Paris (APHP), 75743 Paris, France.
Pierre FloriLaboratoire de Parasitologie Mycologie, CHU Saint-Etienne, 42055 Saint-Etienne, France.
Julie BrunetLaboratoire de Parasitologie et de Mycologie Médicale, Plateau Technique de Microbiologie, Hôpitaux Universitaires de Strasbourg, 67091 Strasbourg, France.
Frédéric DalleLaboratoire de Parasitologie-Mycologie, Plateforme de Biologie Hospitalo-universitaire CHU Dijon; UMR PAM Univ Bourgogne Franche-Comté - AgroSup Dijon - Equipe Vin, Aliment, Microbiologie, Stress, 21079 Dijon, France - CNR LE Cryptosporidioses, Santé Publique France, 76031 Rouen, France.
Loïc FavennecService de Parasitologie Mycologie, CHU Rouen; EA ESCAPE 7510, Université de Rouen Normandie, 76031 Rouen, France - CNR LE Cryptosporidioses, Santé Publique France, 76031 Rouen, France.
Philippe PoirierLaboratoire de Parasitologie-Mycologie, CHU Clermont-Ferrand, 3IHP, 63003 Clermont-Ferrand, France - Microbes, Intestin, Inflammation et Susceptibilité de l'Hôte (M2iSH), UMR Inserm/Université Clermont Auvergne U1071, USC INRA 2018, 63000 Clermont-Ferrand, France.ORCID 0000-0001-9173-2634
French Microsporidiosis Network
Inserm · FRSanté Publique France · FRCentre Hospitalier Universitaire Amiens-Picardie · FRCentre Hospitalier Universitaire de Clermont-Ferrand · FRCentre Hospitalier Universitaire de Lille · FRCentre Hospitalier Universitaire de Saint-Étienne · FRHôpital Necker-Enfants Malades · FRHôpitaux Universitaires de Strasbourg · FRLaboratoire de Chimie Physique et Microbiologie pour l'Environnement · FRNormandie Université · FRUniversité Paris Cité · FRUniversité Paris-Est Créteil · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cases of intestinal microsporidiosis infection are underestimated and affect both immunocompromized and immunocompetent patients. Real-time PCR is superseding microscopic examination for its diagnosis in medical analysis laboratories. However, few manufacturers include microsporidia in their PCR panel for the diagnosis of infectious gastroenteritis. Here, we evaluated the performances of the real-time PCR assays microsporidia generic and microsporidia typing (Bio-Evolution, France) on the Rotor-Gene Q real-time PCR cycler (Qiagen, France). We included 45 negative and 44 positive stool samples for Enterocytozoon bieneusi (n = 34, with various genotypes), Encephalitozoon intestinalis (n = 4), Encephalitozoon hellem (n = 4), and Encephalitozoon cuniculi (n = 2). We also studied a four-year survey of an inter-laboratory quality control program including 9 centers that used this commercial assay. Sensitivity and specificity of the microsporidia generic assay were 86.4% and 93.3%, respectively. Encephalitozoon hellem and Encephalitozoon cuniculi were detected by the microsporidia generic PCR assay but not by the microsporidia typing PCR assay. These results were consistent with the results of the inter-laboratory quality control program. In conclusion, Bio-Evolution Real-time PCR assays are useful tools for intestinal microsporidiosis, but negative results for microsporidia typing assays require supplementary analyses to confirm E. hellem or E. cuniculi infections.

Indexed as

EnterocytozoonMicrosporidiaMicrosporidiosisEncephalitozoonHumansReal-Time Polymerase Chain ReactionBio-EvolutionEncephalitozoon intestinalisEnterocytozoon bieneusiMicrosporidiosisReal-time PCR

Identifiers

PMID36426934
PMCPMC9879149
OpenAlexW4310463664

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.