Evidence map›Paper›PMID 36423778›Full record

ArticleGene2023

Loci on chromosome 12q13.2 encompassing ERBB3, PA2G4 and RAB5B are associated with polycystic ovary syndrome.

R Alan Harris, Kellie J Archer, Mark O Goodarzi, Timothy P York, Jeffrey Rogers, Andrea Dunaif, Jan M McAllister, Jerome F Strauss

Open access · hybridAbstract read
In one paragraph

Article in Gene, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  5. Polycystic ovary syndrome.Nature reviews. Disease primers · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 7 institutions in 1 country.

R Alan HarrisHuman Genome Sequencing Center and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030 USA. Electronic address: rharris1@bcm.edu.
Kellie J ArcherDivision of Biostatistics, College of Public Health, The Ohio State University, Columbus, OH 43210 USA. Electronic address: archer.43@osu.edu.
Mark O GoodarziDivision of Endocrinology, Diabetes, and Metabolism, Cedars-Sinai Medical Center, Los Angeles, CA 90048 USA. Electronic address: mark.goodarzi@cshs.org.
Timothy P YorkDepartment of Human and Molecular Genetics, Virginia Commonwealth University, Richmond, VA 23298 USA; Department of Obstetrics and Gynecology, Virginia Commonwealth University School of Medicine, Richmond, VA 23298 USA. Electronic address: tpyork@vcu.edu.
Jeffrey RogersHuman Genome Sequencing Center and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030 USA. Electronic address: jr13@bcm.edu.
Andrea DunaifDivision of Endocrinology, Diabetes and Bone Disease, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY 10029 USA. Electronic address: andrea.dunaif@mssm.edu.
Jan M McAllisterDepartment of Pathology, Penn State Hershey College of Medicine, Hershey, PA 17033 USA. Electronic address: jxm63@psu.edu.
Jerome F StraussDepartment of Obstetrics and Gynecology, Virginia Commonwealth University School of Medicine, Richmond, VA 23298 USA; Department of Obstetrics and Gynecology, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104 USA. Electronic address: jerome.strauss@pennmedicine.upenn.edu.
Virginia Commonwealth University · USBaylor College of Medicine · USBaylor Genetics · USCedars-Sinai Medical Center · USIcahn School of Medicine at Mount Sinai · USPenn State Milton S. Hershey Medical Center · USThe Ohio State University · US

Funding

Genome-Wide Association Scan of Polycystic Ovary Syndrome PhenotypesR01HD057223 · NICHD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI DUNAIF, ANDREA E · 2009 to 2010
$5.3M
Genetically Validated PCOS Subtypes: Data-Driven Clinical Translation for Improved Diagnosis and Comprehensive Risk StratificationR01HD100812 · NICHD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Andrea Dunaif · 2020 to 2026
$4.1M
Multiethnic Fine-Mapping of Polycystic Ovary Syndrome Susceptibility LociR01HD085227 · NICHD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI CHEN, ZIJIANG, DUNAIF, ANDREA E · 2016 to 2020
$3.2M
Functional Analysis of PCOS Candidate GenesR01HD083323 · NICHD · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI MCALLISTER, JAN M, STRAUSS, JEROME F · 2016 to 2020
$2.7M
Whole exome analyses in naturally occurring hyperandrogenic female monkeysR21HD102172 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI ABBOTT, DAVID H, LEVINE, JON E · 2020 to 2021
$400k
NICHD NIH HHS R01 HD057223NICHD NIH HHS R01 HD083323NICHD NIH HHS R01 HD085227NICHD NIH HHS R01 HD100812NICHD NIH HHS R21 HD102172
6 · The paper itself

Abstract

Polycystic ovary syndrome (PCOS) is characterized by hyperandrogenemia of ovarian theca cell origin. We report significant association of androgen production with 15 single nucleotide variants (SNVs) identified by exome sequencing of theca cells from women with PCOS and normal ovulatory women. Ten SNVs are located within a 150 kbp region on 12q13.2 which encompasses loci identified in PCOS genome-wide association studies (GWAS) and contains PCOS candidate genes ERBB3 and RAB5B. The region also contains PA2G4 which encodes a transcriptional corepressor of androgen receptor and androgen receptor-regulated genes. PA2G4 has not previously been recognized as related to PCOS in published GWAS studies. Two of the SNVs are predicted to have functional consequences (ERBB3 missense SNV, PA2G4 promoter SNV). PA2G4 interacts with the ERBB3 cytoplasmic domain containing the missense variant, suggesting a potential signaling pathway disruption that could lead to the PCOS ovarian phenotype. Single cell RNA sequencing of theca cells showed significantly less expression of PA2G4 after forskolin treatment in PCOS cells compared to normal cells (p

Indexed as

HyperandrogenismPolycystic Ovary Syndromerab5 GTP-Binding ProteinsReceptor, ErbB-3RNA-Binding ProteinsAdaptor Proteins, Signal TransducingChromosomesFemaleGenome-Wide Association StudyHumansReceptors, AndrogenAdaptor Proteins, Signal TransducingERBB3 protein, humanPA2G4 protein, humanRAB5C protein, humanrab5 GTP-Binding ProteinsReceptor, ErbB-3Receptors, AndrogenRNA-Binding ProteinsCandidate genesFamily cohortPolycystic ovary syndromeSingle nucleotide variantsTheca cells

Identifiers

PMID36423778
PMCPMC9811427
OpenAlexW4309531574

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.