Evidence map›Paper›PMID 36422619›Full record

ArticlePathogens (Basel, Switzerland)2022

Isolation of a New Infectious Pancreatic Necrosis Virus (IPNV) Variant from Genetically Resistant Farmed Atlantic Salmon (

Marcos Godoy, Molly J T Kibenge, Marco Montes de Oca, Juan Pablo Pontigo, Yoandy Coca, Diego Caro, Karina Kusch, Rudy Suarez, Ian Burbulis, Frederick S B Kibenge

Open access · goldAbstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Marcos GodoyLaboratorio de Biotecnología Aplicada, Facultad de Ciencias Naturales, Escuela de Medicina Veterinaria, Sede de la Patagonia, Puerto Montt 5480000, Chile.ORCID 0000-0003-0523-7536
Molly J T KibengeDepartment of Pathology and Microbiology, Atlantic Veterinary College, University of Prince Edward Island, 550 University Ave, Charlottetown, PEI C1A 4P3, Canada.ORCID 0000-0003-3406-3766
Marco Montes de OcaCentro de Investigaciones Biológicas Aplicadas (CIBA), Puerto Montt 5480000, Chile.
Juan Pablo PontigoLaboratorio de Biotecnología Aplicada, Facultad de Ciencias Naturales, Escuela de Medicina Veterinaria, Sede de la Patagonia, Puerto Montt 5480000, Chile.
Yoandy CocaLaboratorio de Energía Renovables y Residuos (LERR-UC), Escuela de Ingeniería, Pontificia Universidad Católica de Chile, Avenida Vicuña Mackenna 4860, Santiago 7820436, Chile.
Diego CaroCentro de Investigaciones Biológicas Aplicadas (CIBA), Puerto Montt 5480000, Chile.
Karina KuschCentro de Investigaciones Biológicas Aplicadas (CIBA), Puerto Montt 5480000, Chile.
Rudy SuarezPrograma de Magíster en Acuicultura, Facultad de Ciencias del Mar, Universidad Católica del Norte, Coquimbo 1281, Chile.
Ian BurbulisFacultad de Medicina, Escuela de Medicina, Sede de la Patagonia, Puerto Montt 5480000, Chile.
Frederick S B KibengeDepartment of Pathology and Microbiology, Atlantic Veterinary College, University of Prince Edward Island, 550 University Ave, Charlottetown, PEI C1A 4P3, Canada.ORCID 0000-0002-3852-282X
Patagonian Ecosystems Investigation Research Center · CLUniversity of Prince Edward Island · CAPontificia Universidad Católica de Chile · CLUniversidad Católica del Norte · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Infectious pancreatic necrosis (IPN), caused by IPNV, affects several species of farmed fish, particularly Atlantic salmon, and is responsible for significant economic losses in salmon aquaculture globally. Despite the introduction of genetically resistant farmed Atlantic salmon and vaccination strategies in the Chilean salmon industry since 2019, the number of IPN outbreaks has been increasing in farmed Atlantic salmon in the freshwater phase. This study examined gross and histopathological lesions of IPNV-affected fish, as well as the IPNV nucleotide sequence encoding the VP2 protein in clinical cases. The mortality reached 0.4% per day, and the cumulative mortality was from 0.4 to 3.5%. IPNV was isolated in the CHSE-214 cell line and was confirmed by RT-PCR, and VP2 sequence analysis. The analyzed viruses belong to IPNV genotype 5 and have 11 mutations in their VP2 protein. This is the first report of IPN outbreaks in farmed Atlantic salmon genetically resistant to IPNV in Chile. Similar outbreaks were previously reported in Scotland and Norway during 2018 and 2019, respectively. This study highlights the importance of maintaining a comprehensive surveillance program in conjunction with the use of farmed Atlantic salmon genetically resistant to IPNV.

Indexed as

Atlantic salmoninfectious pancreatic necrosis virus (IPNV)quantitative trait locus (QTL)Salmo salarviral protein 2 (VP2) mutations

Identifiers

PMID36422619
PMCPMC9692529
OpenAlexW4309607324

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.