Evidence map›Paper›PMID 36419440›Full record

ArticlePatterns (New York, N.Y.)2022

Data-driven learning of Boolean networks and functions by optimal causation entropy principle.

Jie Sun, Abd AlRahman R AlMomani, Erik Bollt

Open access · goldAbstract read
In one paragraph

Article in Patterns (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 7 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Jie SunDepartment of Mathematics, Clarkson University, Potsdam, NY 13699, USA.
Abd AlRahman R AlMomaniDepartment of Mathematics, Embry-Riddle Aeronautical University, Prescott, AZ 86301, USA.
Erik BolltClarkson Center for Complex Systems Science, Potsdam, NY 13699, USA.
Clarkson University · USEmbry–Riddle Aeronautical University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Boolean functions, and networks thereof, are useful for analysis of complex data systems, including from biological systems, bioinformatics, decision making, medical fields, and finance. However, automated learning of a Boolean networked function, from data, is a challenging task due in part to the large number of unknown structures of the network and the underlying functions. In this paper, we develop a new information theoretic methodology, called Boolean optimal causation entropy, that we show is significantly more efficient than previous approaches. Our method is computationally efficient and also resilient to noise. Furthermore, it allows for selection of features that best explains the process, described as a networked Boolean function reduced-order model. We highlight our method to the feature selection in several real-world examples: (1) diagnosis of urinary diseases, (2) cardiac single proton emission computed tomography diagnosis, (3) informative positions in the game Tic-Tac-Toe, and (4) risk causality analysis of loans in default status.

Indexed as

Boolean functionBoolean networkcausal network inferenceentropyinformation flowquantitative biologyrisk analysis

Identifiers

PMID36419440
PMCPMC9676542
OpenAlexW4308806449

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.