Evidence map›Paper›PMID 36419260›Full record

ArticleClinical and translational medicine2022

Spliceosomal profiling identifies EIF4A3 as a novel oncogene in hepatocellular carcinoma acting through the modulation of FGFR4 splicing.

Juan L López-Cánovas, Natalia Hermán-Sánchez, Maria Trinidad Moreno-Montilla, Mercedes Del Rio-Moreno, Emilia Alors-Perez, Marina E Sánchez-Frias, Víctor Amado, Rubén Ciria, Javier Briceño, Manuel de la Mata and 4 more

Open access · goldAbstract read
In one paragraph

Article in Clinical and translational medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

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  10. The oncogenic role of EIF4A3/CDC20 axis in the endometrial cancer.Journal of molecular medicine (Berlin, Germany) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 2 countries.

Juan L López-CánovasMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Natalia Hermán-SánchezMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Maria Trinidad Moreno-MontillaMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Mercedes Del Rio-MorenoMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Emilia Alors-PerezMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Marina E Sánchez-FriasMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Víctor AmadoMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Rubén CiriaMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Javier BriceñoMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Manuel de la MataMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Justo P CastañoMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Manuel Rodriguez-PerálvarezMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Raúl M LuqueMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.
Manuel D GaheteMaimonides Biomedical Research Institute of Cordoba (IMIBIC), Cordoba, Spain.ORCID 0000-0002-4578-2179
Spanish Biomedical Research Centre in Physiopathology of Obesity and Nutrition · ESInstituto Maimónides de Investigación Biomédica de Córdoba · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionAltered splicing landscape is an emerging cancer hallmark; however, the dysregulation and implication of the cellular machinery controlling this process (spliceosome components and splicing factors) in hepatocellular carcinoma (HCC) is poorly known. This study aimed to comprehensively characterize the spliceosomal profile and explore its role in HCC.

methodsExpression levels of 70 selected spliceosome components and splicing factors and clinical implications were evaluated in two retrospective and six in silico HCC cohorts. Functional, molecular and mechanistic studies were implemented in three cell lines (HepG2, Hep3B and SNU-387) and preclinical Hep3B-induced xenograft tumours.

resultsSpliceosomal dysregulations were consistently found in retrospective and in silico cohorts. EIF4A3, RBM3, ESRP2 and SRPK1 were the most dysregulated spliceosome elements in HCC. EIF4A3 expression was associated with decreased survival and greater recurrence. Plasma EIF4A3 levels were significantly elevated in HCC patients. In vitro EIF4A3-silencing (or pharmacological inhibition) resulted in reduced aggressiveness, and hindered xenograft-tumours growth in vivo, whereas EIF4A3 overexpression increased tumour aggressiveness. EIF4A3-silencing altered the expression and splicing of key HCC-related genes, specially FGFR4. EIF4A3-silencing blocked the cellular response to the natural ligand of FGFR4, FGF19. Functional consequences of EIF4A3-silencing were mediated by FGFR4 splicing as the restoration of non-spliced FGFR4 full-length version blunted these effects, and FGFR4 inhibition did not exert further effects in EIF4A3-silenced cells.

conclusionsSplicing machinery is strongly dysregulated in HCC, providing a source of new diagnostic, prognostic and therapeutic options in HCC. EIF4A3 is consistently elevated in HCC patients and associated with tumour aggressiveness and mortality, through the modulation of FGFR4 splicing.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsDEAD-box RNA HelicasesEukaryotic Initiation Factor-4AHeart MurmursHumansOncogenesProtein Serine-Threonine KinasesReceptor, Fibroblast Growth Factor, Type 4Retrospective StudiesRNA-Binding ProteinsRNA Splicing FactorsSpliceosomesDEAD-box RNA HelicasesEIF4A3 protein, humanEukaryotic Initiation Factor-4AFGFR4 protein, humanProtein Serine-Threonine KinasesRBM3 protein, humanReceptor, Fibroblast Growth Factor, Type 4RNA-Binding ProteinsRNA Splicing FactorsSRPK1 protein, humanFGF19liver cancerpreclinical modelsplicing machinery

Identifiers

PMID36419260
PMCPMC9684617
OpenAlexW4309915649

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.