Evidence map›Paper›PMID 36418747›Full record

ArticleRice (New York, N.Y.)2022

Control of Grain Weight and Size in Rice (Oryza sativa L.) by OsPUB3 Encoding a U-Box E3 Ubiquitin Ligase.

Shi-Lin Wang, Zhen-Hua Zhang, Ye-Yang Fan, De-Run Huang, Yao-Long Yang, Jie-Yun Zhuang, Yu-Jun Zhu

Abstract read
In one paragraph

Article in Rice (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Review
  3. Candidate gene analysis of rice grain shape based on genome-wide association study.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shi-Lin Wang *State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Zhen-Hua Zhang *State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Ye-Yang FanState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
De-Run HuangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Yao-Long YangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China.
Jie-Yun ZhuangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China. zhuangjieyun@caas.cn.
Yu-Jun ZhuState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, 310006, China. zhuyujun@caas.cn.

Funding

Central Public-interest Scientific Institution Basal Research Fund CPSIBRF-CNRRI-202112Hainan Yazhou Bay Seed Laboratory B21HJ0217The Agricultural Science and Technology Innovation Program CAAS-ASTIP-2021-CNRRIthe Key R&D Program of Zhejiang Province 2021C02063-6
6 · The paper itself

Abstract

Grain weight and size, mostly determined by grain length, width and thickness, are crucial traits affecting grain quality and yield in rice. A quantitative trait locus controlling grain length and width in rice, qGS1-35.2, was previously fine-mapped in a 57.7-kb region on the long arm of chromosome 1. In this study, OsPUB3, a gene encoding a U-box E3 ubiquitin ligase, was validated as the causal gene for qGS1-35.2. The effects were confirmed firstly by using CRISPR/Cas9-based mutagenesis and then through transgenic complementation of a Cas9-free knock-out (KO) mutant. Two homozygous KO lines were produced, each having a 1-bp insertion in OsPUB3 which caused frameshift mutation and premature termination. Compared with the recipient and a transgenic-negative control, both mutants showed significant decreases in grain weight and size. In transgenic complementation populations derived from four independent T

Indexed as

Grain sizeGrain weightMilling qualityRiceUbiquitin-ligase enzymeU-box domain

Identifiers

PMID36418747
PMCPMC9684364

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.