Evidence map›Paper›PMID 36418427›Full record

ArticleCommunications biology2022

Dementia with Lewy bodies post-mortem brains reveal differentially methylated CpG sites with biomarker potential.

Xiaojian Shao, Sangeetha Vishweswaraiah, Miroslava Čuperlović-Culf, Ali Yilmaz, Celia M T Greenwood, Anuradha Surendra, Bernadette McGuinness, Peter Passmore, Patrick G Kehoe, Michael E Maddens and 4 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Xiaojian ShaoNational Research Council of Canada, Digital Technologies Research Centre, Ottawa, Canada. xiaojian.shao@nrc-cnrc.gc.ca.ORCID 0000-0002-3044-621X
Sangeetha VishweswaraiahOakland University-William Beaumont School of Medicine, Rochester, MI, 48309, USA.ORCID 0000-0001-5681-5143
Miroslava Čuperlović-CulfNational Research Council of Canada, Digital Technologies Research Centre, Ottawa, Canada.
Ali YilmazOakland University-William Beaumont School of Medicine, Rochester, MI, 48309, USA.
Celia M T GreenwoodLady Davis Institute for Medical Research, Jewish General Hospital, Montréal, Canada.ORCID 0000-0002-2427-5696
Anuradha SurendraNational Research Council of Canada, Digital Technologies Research Centre, Ottawa, Canada.
Bernadette McGuinnessCentre for Public Health, School of Medicine, Dentistry and Biomedical Sciences, Queen's University Belfast, Belfast, UK.
Peter PassmoreCentre for Public Health, School of Medicine, Dentistry and Biomedical Sciences, Queen's University Belfast, Belfast, UK.
Patrick G KehoeDementia Research Group, Translational Health Sciences, Bristol Medical School, University of Bristol, Bristol, UK.ORCID 0000-0002-7542-1139
Michael E MaddensOakland University-William Beaumont School of Medicine, Rochester, MI, 48309, USA.
Steffany A L BennettOttawa Institute of Systems Biology, Ottawa, Ontario, Canada.
Brian D GreenInstitute for Global Food Security, School of Biological Sciences, Faculty of Medicine, Health and Life Sciences, Queen's University Belfast, Northern Ireland, UK.
Uppala RadhakrishnaOakland University-William Beaumont School of Medicine, Rochester, MI, 48309, USA.ORCID 0000-0002-6617-5634
Stewart F GrahamOakland University-William Beaumont School of Medicine, Rochester, MI, 48309, USA. stewart.graham@beaumont.edu.ORCID 0000-0003-1001-0002
Oakland University · USQueen's University Belfast · GBNational Research Council Canada · CAUniversity of Ottawa · CAJewish General Hospital · CAUniversity of Bristol · GB

Funding

Developing therapeutic strategies to elicit metabolic synthetic lethality in glioblastomaR01NS110838 · NINDS · WILLIAM BEAUMONT HOSPITAL RESEARCH INST · PI CHINNAIYAN, PRAKASH · 2020 to 2024
$1.7M
Are the impairments of arginine metabolism as found in Alzheimer's disease also present in patients developing post-operative delirium and cognitive decline?R21AG067083 · NIA · WILLIAM BEAUMONT HOSPITAL RESEARCH INST · PI CUNNINGHAM, EMMA LOUISE, GRAHAM, STEWART F · 2020 to 2020
$330k
Medical Research Council CIC-CD1718-CIC25NIA NIH HHS 1R21AG067083-01NIA NIH HHS R21 AG067083NINDS NIH HHS 1R01NS110838-01A1NINDS NIH HHS R01 NS110838
6 · The paper itself

Abstract

Dementia with Lewy bodies (DLB) is a common form of dementia with known genetic and environmental interactions. However, the underlying epigenetic mechanisms which reflect these gene-environment interactions are poorly studied. Herein, we measure genome-wide DNA methylation profiles of post-mortem brain tissue (Broadmann area 7) from 15 pathologically confirmed DLB brains and compare them with 16 cognitively normal controls using Illumina MethylationEPIC arrays. We identify 17 significantly differentially methylated CpGs (DMCs) and 17 differentially methylated regions (DMRs) between the groups. The DMCs are mainly located at the CpG islands, promoter and first exon regions. Genes associated with the DMCs are linked to "Parkinson's disease" and "metabolic pathway", as well as the diseases of "severe intellectual disability" and "mood disorders". Overall, our study highlights previously unreported DMCs offering insights into DLB pathogenesis with the possibility that some of these could be used as biomarkers of DLB in the future.

Indexed as

Lewy Body DiseaseAutopsyBiomarkersBrainCpG IslandsHumansBiomarkers

Identifiers

PMID36418427
PMCPMC9684551
OpenAlexW4309889473

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.