Evidence map›Paper›PMID 36418322›Full record

ArticleNature communications2022

A non-coding GWAS variant impacts anthracycline-induced cardiotoxic phenotypes in human iPSC-derived cardiomyocytes.

Xi Wu, Fei Shen, Guanglong Jiang, Gloria Xue, Santosh Philips, Laura Gardner, Geneva Cunningham, Casey Bales, Erica Cantor, Bryan Paul Schneider

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
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  4. Article
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  9. Review
  10. Anthracycline Toxicity: Light at the End of the Tunnel?Annual review of pharmacology and toxicology · 2024
    Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Xi Wu *Department of Hematology and Oncology, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.
Fei Shen *Department of Hematology and Oncology, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.ORCID 0000-0003-1545-0955
Guanglong JiangDepartment of Hematology and Oncology, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.ORCID 0000-0002-9233-052X
Gloria XueDepartment of Hematology and Oncology, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.ORCID 0000-0003-3689-3149
Santosh PhilipsDepartment of Hematology and Oncology, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.ORCID 0000-0003-2420-0819
Laura GardnerDepartment of Hematology and Oncology, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.
Geneva CunninghamDepartment of Hematology and Oncology, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.ORCID 0000-0001-5648-7565
Casey BalesDepartment of Hematology and Oncology, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.
Erica CantorDepartment of Hematology and Oncology, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.ORCID 0000-0003-0282-0080
Bryan Paul SchneiderDepartment of Hematology and Oncology, Indiana University School of Medicine, Indianapolis, IN, 46202, USA. bpschnei@iu.edu.ORCID 0000-0003-1868-7739
Indiana University School of Medicine

Funding

Indiana Medical Scientist/Engineer Training ProgramT32GM077229 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI GASTON, BENJAMIN, HERBERT, BRITTNEY-SHEA · 2008 to 2022
$6.0M
NIGMS NIH HHS T32 GM077229
6 · The paper itself

Abstract

Anthracyclines, widely used to treat breast cancer, have the potential for cardiotoxicity. We have previously identified and validated a germline single nucleotide polymorphism, rs28714259, associated with an increased risk of anthracycline-induced heart failure. We now provide insights into the mechanism by which rs28714259 might confer increased risk of cardiac damage. Using hiPSC-derived cardiomyocyte cell lines with either intrinsic polymorphism or CRISPR-Cas9-mediated deletion of rs28714259 locus, we demonstrate that glucocorticoid receptor signaling activated by dexamethasone pretreatment prior to doxorubicin exposure preserves cardiomyocyte viability and contractility in cardiomyocytes containing the major allele. Homozygous loss of the rs28714259 major allele diminishes dexamethasone's protective effect. We further demonstrate that the risk allele of rs28714259 disrupts glucocorticoid receptor and rs28714259 binding affinity. Finally, we highlight the activation of genes and pathways involved in cardiac hypertrophy signaling that are blocked by the risk allele, suggesting a decreased adaptive survival response to doxorubicin-related stress.

Indexed as

Induced Pluripotent Stem CellsPolyketidesAnthracyclinesAntibiotics, AntineoplasticCardiotoxicityDexamethasoneDoxorubicinGenome-Wide Association StudyHumansMyocytes, CardiacPhenotypeReceptors, GlucocorticoidTopoisomerase II InhibitorsAnthracyclinesAntibiotics, AntineoplasticDexamethasoneDoxorubicinPolyketidesReceptors, GlucocorticoidTopoisomerase II Inhibitors

Identifiers

PMID36418322
PMCPMC9684507
OpenAlexW4309822499

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.