Evidence map›Paper›PMID 36417434›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Fin ray branching is defined by TRAP

João Cardeira-da-Silva, Anabela Bensimon-Brito, Marco Tarasco, Ana S Brandão, Joana T Rosa, Jorge Borbinha, Paulo J Almeida, António Jacinto, M Leonor Cancela, Paulo J Gavaia and 2 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Sonic hedgehog signaling promotes basal epidermalbioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. Article
  5. Disruption of the creb3l1 gene causes defects in caudal fin regeneration and patterning in zebrafish Danio rerio.Developmental dynamics : an official publication of the American Association of Anatomists · 2024
    Article
  6. Review
  7. Article
  8. Thyroid hormone regulates proximodistal patterning in fin rays.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

João Cardeira-da-SilvaDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, 61231 Bad Nauheim, Germany.ORCID 0000-0003-3722-8810
Anabela Bensimon-BritoDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, 61231 Bad Nauheim, Germany.ORCID 0000-0003-1663-2232
Marco TarascoDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, 61231 Bad Nauheim, Germany.ORCID 0000-0001-5894-6526
Ana S BrandãoCEDOC-Chronic Diseases Research Center, NOVA Medical School, NOVA University of Lisbon, 1150-082 Lisbon, Portugal.ORCID 0000-0001-5842-033X
Joana T RosaCCMAR-Centre of Marine Sciences, University of Algarve, 8005-139 Faro, Portugal.ORCID 0000-0001-7947-2681
Jorge BorbinhaCEDOC-Chronic Diseases Research Center, NOVA Medical School, NOVA University of Lisbon, 1150-082 Lisbon, Portugal.
Paulo J AlmeidaSTAB VIDA-Investigação e Serviços em Ciências Biológicas, 2825-182 Caparica, Portugal.
António JacintoCEDOC-Chronic Diseases Research Center, NOVA Medical School, NOVA University of Lisbon, 1150-082 Lisbon, Portugal.ORCID 0000-0002-4193-6089
M Leonor CancelaCCMAR-Centre of Marine Sciences, University of Algarve, 8005-139 Faro, Portugal.ORCID 0000-0003-3114-6662
Paulo J GavaiaCCMAR-Centre of Marine Sciences, University of Algarve, 8005-139 Faro, Portugal.
Didier Y R StainierDepartment of Developmental Genetics, Max Planck Institute for Heart and Lung Research, 61231 Bad Nauheim, Germany.ORCID 0000-0002-0382-0026
Vincent LaizéCCMAR-Centre of Marine Sciences, University of Algarve, 8005-139 Faro, Portugal.ORCID 0000-0001-9565-9198

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The shaping of bone structures relies on various cell types and signaling pathways. Here, we use the zebrafish bifurcating fin rays during regeneration to investigate bone patterning. We found that the regenerating fin rays form via two mineralization fronts that undergo an osteoblast-dependent fusion/stitching until the branchpoint, and that bifurcation is not simply the splitting of one unit into two. We identified tartrate-resistant acid phosphatase-positive osteolytic tubular structures at the branchpoints, hereafter named osteolytic tubules (OLTs). Chemical inhibition of their bone-resorbing activity strongly impairs ray bifurcation, indicating that OLTs counteract the stitching process. Furthermore, by testing different osteoactive compounds, we show that the position of the branchpoint depends on the balance between bone mineralization and resorption activities. Overall, these findings provide a unique perspective on fin ray formation and bifurcation, and reveal a key role for OLTs in defining the proximo-distal position of the branchpoint.

Indexed as

ZebrafishZebrafish ProteinsAnimalsBone and BonesOsteoblastsSignal TransductionZebrafish Proteinsbifurcationbone patterningbone resorptionfin regenerationosteoclasts

Identifiers

PMID36417434
PMCPMC9889879

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.