Evidence map›Paper›PMID 36417395›Full record

ArticlePloS one2022

A comparison of drying methods on the quality for bryophyte molecular specimens collected in the field.

Fengjiao Shen, Lin Li, Dan Wang, Mengzhen Wang, James R Shevock, Jiancheng Zhao, Shuo Shi

Abstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Evaluation of Lipid Changes During the Drying Process ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fengjiao ShenCollege of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei, China.ORCID 0000-0003-1458-9680
Lin LiCollege of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei, China.
Dan WangCollege of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei, China.
Mengzhen WangCollege of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei, China.
James R ShevockDepartment of Botany, California Academy of Sciences, San Francisco, California, United States of America.
Jiancheng ZhaoCollege of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei, China.
Shuo ShiCollege of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei, China.ORCID 0000-0001-8428-7261

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A major challenge in extracting high-quality DNA from bryophytes is the treatment of bryophyte material in the field. The existing and commonly used treatment methods in the field have several shortcomings. Natural drying methods can lead to DNA breaks. In addition, it is highly cumbersome to carry large quantities of silica gel in the field due to its weight and high risk of contamination among samples. In this study, we explored more convenient drying methods to treat bryophyte specimens and promote more efficient DNA recovery. The quantity and quality of genomic DNA extracted from every bryophyte species using different drying methods, including hot-air drying methods (150°C, 80°C, and 40°C), natural drying method, and silica gel drying method, were measured. Spectrophotometry, electrophoresis, and PCR amplification were performed to assess the effects of different drying methods. The results of total DNA purity, total DNA concentration, PCR success, and OD 260/230 ratios suggested that the hot-air drying (40-80°C) was the best method. The morphological comparison revealed that hot-air drying at 40°C and 80°C exerted no significant adverse effects on plant morphology and taxonomic studies. Thus, this method prevents rapid DNA degradation and silica gel pollution and saves the workforce from carrying large amounts of silica gel to the field. Several inexpensive devices, such as portable hairdryers, fan heaters, and electric blankets, are available that can be easily carried to the field for drying molecular specimens.

Indexed as

BryophytaDesiccationDNAPolymerase Chain ReactionSilica GelDNASilica Gel

Identifiers

PMID36417395
PMCPMC9683613

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.