Evidence map›Paper›PMID 36416575›Full record

ArticleThe FEBS journal2023

Strain-dependent differences in coordination of yeast signalling networks.

Taylor D Scott, Ping Xu, Megan N McClean

Abstract read
In one paragraph

Article in The FEBS journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Surprising regulatory plasticity for the conserved HOG pathway in diversebioRxiv : the preprint server for biology · 2025
    Article
  2. Article
  3. Article
  4. TheInternational journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Taylor D ScottDepartment of Biomedical Engineering, University of Wisconsin-Madison, WI, USA.ORCID 0000-0002-2105-3748
Ping XuLewis-Sigler Institute for Integrative Biology, Princeton University, NJ, USA.
Megan N McCleanDepartment of Biomedical Engineering, University of Wisconsin-Madison, WI, USA.ORCID 0000-0002-1141-4802

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Christian Capitini · 1985 to 2026
$142.6M
Institutional Training in the Genomic SciencesT32HG002760 · NHGRI · UNIVERSITY OF WISCONSIN-MADISON · PI Qiongshi Lu · 2003 to 2026
$17.7M
Elucidating the network design principles of biological signal processingR35GM128873 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Megan N McClean · 2018 to 2026
$4.0M
NCI NIH HHS P30 CA014520NHGRI NIH HHS T32 HG002760NIGMS NIH HHS R35 GM128873NIGMS NIH HHS R35GM128873
6 · The paper itself

Abstract

The yeast mitogen-activated protein kinase pathways serve as a model system for understanding how network interactions affect the way in which cells coordinate the response to multiple signals. We have quantitatively compared two yeast strain backgrounds YPH499 and ∑1278b (both of which have previously been used to study these pathways) and found several important differences in how they coordinate the interaction between the high osmolarity glycerol (HOG) and mating pathways. In the ∑1278b background, in response to simultaneous stimulus, mating pathway activation is dampened and delayed in a dose-dependent manner. In the YPH499 background, only dampening is dose-dependent. Furthermore, leakage from the HOG pathway into the mating pathway (crosstalk) occurs during osmostress alone in the ∑1278b background only. The mitogen-activated protein kinase Hog1p suppresses crosstalk late in an induction time course in both strains but does not affect the early crosstalk seen in the ∑1278b background. Finally, the kinase Rck2p plays a greater role suppressing late crosstalk in the ∑1278b background than in the YPH499 background. Our results demonstrate that comparisons between laboratory yeast strains provide an important resource for understanding how signalling network interactions are tuned by genetic variation without significant alteration to network structure.

Indexed as

Saccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsGlycerolMitogen-Activated Protein KinasesOsmolar ConcentrationSignal TransductionGlycerolMitogen-Activated Protein KinasesSaccharomyces cerevisiae ProteinscrosstalkHOGMAPK signallingmatingsignal transduction

Identifiers

PMID36416575
PMCPMC10121740

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.