Evidence map›Paper›PMID 36416528›Full record

ArticleeLife2022

A general approach for stabilizing nanobodies for intracellular expression.

John G Dingus, Jonathan C Y Tang, Ryoji Amamoto, Grace K Wallick, Constance L Cepko

Abstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Programmable nanobody circuits for cell selection.bioRxiv : the preprint server for biology · 2026
    Article
  10. Single-Molecule Imaging of Endogenous Proteins.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  11. Article
  12. Nanobodies targeting hnRNPA2/B1 and tau.bioRxiv : the preprint server for biology · 2025
    Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

John G DingusHoward Hughes Medical Institute, Blavatnik Institute, Harvard Medical School, Boston, United States.ORCID 0000-0001-7928-8067
Jonathan C Y TangHoward Hughes Medical Institute, Blavatnik Institute, Harvard Medical School, Boston, United States.ORCID 0000-0002-2376-6901
Ryoji AmamotoHoward Hughes Medical Institute, Blavatnik Institute, Harvard Medical School, Boston, United States.
Grace K WallickHoward Hughes Medical Institute, Blavatnik Institute, Harvard Medical School, Boston, United States.
Constance L CepkoHoward Hughes Medical Institute, Blavatnik Institute, Harvard Medical School, Boston, United States.ORCID 0000-0002-9945-6387

Funding

Elucidating the molecular and cellular mechanisms underlying cone survival in the peripheral retina in mouse models of Retinitis PigmentosaK99EY032110 · NEI · HARVARD MEDICAL SCHOOL · PI AMAMOTO, RYOJI · 2021 to 2022
$178k
Howard Hughes Medical InstituteNEI NIH HHS K99 EY032110
6 · The paper itself

Abstract

Conventional antibodies and their derived fragments are difficult to deploy against intracellular targets in live cells, due to their bulk and structural complexity. Nanobodies provide an alternative modality, with well-documented examples of intracellular expression. Despite their promise as intracellular reagents, there has not been a systematic study of nanobody intracellular expression. Here, we examined intracellular expression of 75 nanobodies from the Protein Data Bank. Surprisingly, a majority of these nanobodies were unstable in cells, illustrated by aggregation and clearance. Using comparative analysis and framework mutagenesis, we developed a general approach that stabilized a great majority of nanobodies that were originally unstable intracellularly, without significantly compromising target binding. This approach led to the identification of distinct sequence features that impacted the intracellular stability of tested nanobodies. Mutationally stabilized nanobody expression was found to extend to in vivo contexts, in the murine retina and in

Indexed as

Single-Domain AntibodiesAnimalsAntibodiesEscherichia coliMiceAntibodiesSingle-Domain Antibodiescell biologyE. colihumanintrabodyintracellular expressionmousenanobodystability

Identifiers

PMID36416528
PMCPMC9683787

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.