Evidence map›Paper›PMID 36416266›Full record

ArticleNucleic acids research2023

MobiDB: 10 years of intrinsically disordered proteins.

Damiano Piovesan, Alessio Del Conte, Damiano Clementel, Alexander Miguel Monzon, Martina Bevilacqua, Maria Cristina Aspromonte, Javier A Iserte, Fernando E Orti, Cristina Marino-Buslje, Silvio C E Tosatto

Abstract read
In one paragraph

Article in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  8. Familial Oculoauriculovertebral Spectrum: A Genomic Investigation of Autosomal Dominant Inheritance.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2026
    Article
  9. A membrane insertion code for intrinsically disordered proteins.bioRxiv : the preprint server for biology · 2026
    Article
  10. Review
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  17. Expose flexible conformations for intrinsically disordered protein.Current research in structural biology · 2025
    Article
  18. Article
  19. Article
  20. Comparative assessment of binding residue predictions in intrinsically disordered regions.Protein science : a publication of the Protein Society · 2025
    Article

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Damiano PiovesanDepartment of Biomedical Sciences, University of Padova, Padova, Italy.ORCID 0000-0001-8210-2390
Alessio Del ConteDepartment of Biomedical Sciences, University of Padova, Padova, Italy.
Damiano ClementelDepartment of Biomedical Sciences, University of Padova, Padova, Italy.
Alexander Miguel MonzonDepartment of Information Engineering, University of Padova, Padova, Italy.ORCID 0000-0003-0362-8218
Martina BevilacquaDepartment of Biomedical Sciences, University of Padova, Padova, Italy.
Maria Cristina AspromonteDepartment of Biomedical Sciences, University of Padova, Padova, Italy.
Javier A IserteBioinformatics Unit, Fundación Instituto Leloir, Buenos Aires, Argentina.
Fernando E OrtiBioinformatics Unit, Fundación Instituto Leloir, Buenos Aires, Argentina.
Cristina Marino-BusljeBioinformatics Unit, Fundación Instituto Leloir, Buenos Aires, Argentina.ORCID 0000-0002-6564-1920
Silvio C E TosattoDepartment of Biomedical Sciences, University of Padova, Padova, Italy.ORCID 0000-0003-4525-7793

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The MobiDB database (URL: https://mobidb.org/) is a knowledge base of intrinsically disordered proteins. MobiDB aggregates disorder annotations derived from the literature and from experimental evidence along with predictions for all known protein sequences. MobiDB generates new knowledge and captures the functional significance of disordered regions by processing and combining complementary sources of information. Since its first release 10 years ago, the MobiDB database has evolved in order to improve the quality and coverage of protein disorder annotations and its accessibility. MobiDB has now reached its maturity in terms of data standardization and visualization. Here, we present a new release which focuses on the optimization of user experience and database content. The major advances compared to the previous version are the integration of AlphaFoldDB predictions and the re-implementation of the homology transfer pipeline, which expands manually curated annotations by two orders of magnitude. Finally, the entry page has been restyled in order to provide an overview of the available annotations along with two separate views that highlight structural disorder evidence and functions associated with different binding modes.

Indexed as

Intrinsically Disordered ProteinsAmino Acid SequenceDatabases, ProteinKnowledge BasesMolecular Sequence AnnotationProtein ConformationIntrinsically Disordered Proteins

Identifiers

PMID36416266
PMCPMC9825420

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.