Evidence map›Paper›PMID 36415826›Full record

ArticleNAR genomics and bioinformatics2022

A single-cell human islet interactome atlas identifies disrupted autocrine and paracrine communications in type 2 diabetes.

Emanuele Bosi, Lorella Marselli, Mara Suleiman, Marta Tesi, Carmela De Luca, Silvia Del Guerra, Miriam Cnop, Decio L Eizirik, Piero Marchetti

Open access · goldAbstract read
In one paragraph

Article in NAR genomics and bioinformatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Emanuele BosiDepartment of Experimental and Clinical Medicine, Pancreatic islets laboratory, University of Pisa, Pisa, Italy.ORCID https://orcid.org/0000-0002-4769-8667
Lorella MarselliDepartment of Experimental and Clinical Medicine, Pancreatic islets laboratory, University of Pisa, Pisa, Italy.
Mara SuleimanDepartment of Experimental and Clinical Medicine, Pancreatic islets laboratory, University of Pisa, Pisa, Italy.
Marta TesiDepartment of Experimental and Clinical Medicine, Pancreatic islets laboratory, University of Pisa, Pisa, Italy.
Carmela De LucaDepartment of Experimental and Clinical Medicine, Pancreatic islets laboratory, University of Pisa, Pisa, Italy.
Silvia Del GuerraDepartment of Experimental and Clinical Medicine, Pancreatic islets laboratory, University of Pisa, Pisa, Italy.
Miriam CnopULB Center for Diabetes Research, Université Libre de Bruxelles, Brussels, Belgium.ORCID https://orcid.org/0000-0002-5112-1692
Decio L EizirikULB Center for Diabetes Research, Université Libre de Bruxelles, Brussels, Belgium.
Piero MarchettiDepartment of Experimental and Clinical Medicine, Pancreatic islets laboratory, University of Pisa, Pisa, Italy.
University of Pisa · ITUniversité Libre de Bruxelles · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A sensible control of hormone secretion from pancreatic islets requires concerted inter-cellular communications, but a comprehensive picture of the whole islet interactome is presently missing. Single-cell transcriptomics allows to overcome this and we used here a single-cell dataset from type 2 diabetic (T2D) and non-diabetic (ND) donors to leverage islet interaction networks. The single-cell dataset contains 3046 cells classified in 7 cell types. The interactions across cell types in T2D and ND were obtained and resulting networks analysed to identify high-centrality genes and altered interactions in T2D. The T2D interactome displayed a higher number of interactions (10 787) than ND (9707); 1289 interactions involved beta cells (1147 in ND). High-centrality genes included EGFR, FGFR1 and FGFR2, important for cell survival and proliferation. In conclusion, this analysis represents the first

Identifiers

PMID36415826
PMCPMC9673496
OpenAlexW4309289771

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.