Evidence map›Paper›PMID 36414972›Full record

ArticleGenome medicine2022

Return of non-ACMG recommended incidental genetic findings to pediatric patients: considerations and opportunities from experiences in genomic sequencing.

Kevin M Bowling, Michelle L Thompson, Melissa A Kelly, Sarah Scollon, Anne M Slavotinek, Bradford C Powell, Brian M Kirmse, Laura G Hendon, Kyle B Brothers, Bruce R Korf and 3 more

Open access · goldAbstract read
In one paragraph

Article in Genome medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 1 country.

Kevin M Bowling *HudsonAlpha Institute for Biotechnology, Huntsville, AL, 35806, USA.
Michelle L Thompson *HudsonAlpha Institute for Biotechnology, Huntsville, AL, 35806, USA.
Melissa A KellyHudsonAlpha Clinical Services Lab, LLC, HudsonAlpha Institute for Biotechnology, Huntsville, USA.
Sarah ScollonDepartment of Pediatrics, Baylor College of Medicine, Houston, TX, 77030, USA.
Anne M SlavotinekDepartment of Pediatrics, University of California, San Francisco, CA, 94158, USA.
Bradford C PowellDepartment of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.
Brian M KirmseDepartment of Pediatrics, University of Mississippi Medical Center, Jackson, MS, 39216, USA.
Laura G HendonDepartment of Pediatrics, University of Mississippi Medical Center, Jackson, MS, 39216, USA.
Kyle B BrothersNorton Children's Research Institute Affiliated with UofL School of Medicine, Louisville, KY, 40202, USA.
Bruce R KorfDepartment of Genetics, University of Alabama at Birmingham, Birmingham, AL, 25294, USA.
Gregory M CooperHudsonAlpha Institute for Biotechnology, Huntsville, AL, 35806, USA.
John M GreallyDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, 10461, USA.
Anna C E HurstDepartment of Genetics, University of Alabama at Birmingham, Birmingham, AL, 25294, USA. achurst@uabmc.edu.
HudsonAlpha Institute for Biotechnology · USUniversity of Alabama at Birmingham · USUniversity of Mississippi Medical Center · USAlbert Einstein College of Medicine · USBaylor College of Medicine · USNorton Healthcare · USUniversity of California, San Francisco · USUniversity of North Carolina at Chapel Hill · US

Funding

Measuring Perceptions of Utility of Clinical Genome Sequencing: Instrument Testing and ValidationU01HG006485 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI MCGUIRE, AMY L, PARSONS, DONALD W. · 2012 to 2021
$22.1M
Sharing Aggregate Genomics Research Findings with Diverse Participants: A Pilot Study of an Innovative Design StrategyU01HG009599 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KOENIG, BARBARA A., KWOK, PUI-YAN · 2017 to 2021
$16.3M
South-seq: DNA sequencing for newborn nurseries in the SouthU01HG007301 · NHGRI · HUDSON-ALPHA INSTITUTE FOR BIOTECHNOLOGY · PI BARSH, GREGORY STEFAN, COOPER, GREGORY MICHAEL · 2017 to 2021
$11.9M
SUPPORT FOR THE ROSE F KENNEDY IDDRC P50P50HD105352 · NICHD · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI SOPHIE MOLHOLM, Steven Upshaw Walkley · 2021 to 2026
$7.0M
NHGRI NIH HHS U01 HG006485NHGRI NIH HHS U01 HG007301NHGRI NIH HHS U01 HG009599NICHD NIH HHS P50 HD105352
6 · The paper itself

Abstract

backgroundThe uptake of exome/genome sequencing has introduced unexpected testing results (incidental findings) that have become a major challenge for both testing laboratories and providers. While the American College of Medical Genetics and Genomics has outlined guidelines for laboratory management of clinically actionable secondary findings, debate remains as to whether incidental findings should be returned to patients, especially those representing pediatric populations.

methodsThe Sequencing Analysis and Diagnostic Yield working group in the Clinical Sequencing Evidence-Generating Research Consortium has collected a cohort of pediatric patients found to harbor a genomic sequencing-identified non-ACMG-recommended incidental finding. The incidental variants were not thought to be associated with the indication for testing and were disclosed to patients and families.

resultsIn total, 23 "non-ACMG-recommended incidental findings were identified in 21 pediatric patients included in the study. These findings span four different research studies/laboratories and demonstrate differences in incidental finding return rate across study sites. We summarize specific cases to highlight core considerations that surround identification and return of incidental findings (uncertainty of disease onset, disease severity, age of onset, clinical actionability, and personal utility), and suggest that interpretation of incidental findings in pediatric patients can be difficult given evolving phenotypes. Furthermore, return of incidental findings can benefit patients and providers, but do present challenges.

conclusionsWhile there may be considerable benefit to return of incidental genetic findings, these findings can be burdensome to providers and present risk to patients. It is important that laboratories conducting genomic testing establish internal guidelines in anticipation of detection. Moreover, cross-laboratory guidelines may aid in reducing the potential for policy heterogeneity across laboratories as it relates to incidental finding detection and return. However, future discussion is required to determine whether cohesive guidelines or policy statements are warranted.

Indexed as

ExomeGenome, HumanBase SequenceChromosome MappingGenomicsHumansUnited StatesActionabilityAge of onsetDisease severityGenetic testingGenomicsIncidental findingsPediatricsPenetrancePersonal utility

Identifiers

PMID36414972
PMCPMC9682742
OpenAlexW4309643793

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.