Evidence map›Paper›PMID 36411330›Full record

ArticleScientific reports2022

Development of a novel electroporation method for the oyster parasite Perkinsus marinus.

Hirokazu Sakamoto, Xiaoxia X Lin, Yun D Bai, Xue F Chen, Ziyue Z Zhang, Yui Honjo, Kenji Hikosaka

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Perkinsus marinus in bioreactor: growth and a cost-reduced growth medium.Journal of industrial microbiology & biotechnology · 2023
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Hirokazu SakamotoDepartment of Infection and Host Defense, Graduate School of Medicine, Chiba University, Chiba, Japan. hzsakamoto@chiba-u.jp.
Xiaoxia X LinDepartment of Infection and Host Defense, Graduate School of Medicine, Chiba University, Chiba, Japan.
Yun D BaiDepartment of Infection and Host Defense, Graduate School of Medicine, Chiba University, Chiba, Japan.
Xue F ChenDepartment of Infection and Host Defense, Graduate School of Medicine, Chiba University, Chiba, Japan.
Ziyue Z ZhangDepartment of Infection and Host Defense, Graduate School of Medicine, Chiba University, Chiba, Japan.
Yui HonjoDepartment of Infection and Host Defense, Graduate School of Medicine, Chiba University, Chiba, Japan.
Kenji HikosakaDepartment of Infection and Host Defense, Graduate School of Medicine, Chiba University, Chiba, Japan.
Chiba University · JP

Funding

Japan Society for the Promotion of Science JP19K16627
6 · The paper itself

Abstract

Gene manipulation techniques are fundamental to molecular biology and are continuously being improved. However, gene transfection methods are not established for many unicellular eukaryotes (protists), thereby hindering molecular biological investigations. The oyster parasite Perkinisus marinus is one of the few protists with established gene transfection and drug selection. Nevertheless, the present protocols are tedious, requiring a specific electroporator and pulse conditions which limits the accessibility of this technique across different research groups. Here, we present alternative buffer and electroporation conditions that make the protocol less restrictive. We revealed the pulse condition that enables the introduction of plasmids into P. marinus cell using Ingenio electroporation buffer and NEPA21 electroporator. We found that number of cells and plasmid concentration were critical parameters for the electroporation system. We also constructed a simpler expression plasmid that is removed needless regions for gene expression in the parasite. Our findings resolved the equipment restriction in electroporation of P. marinus and would be a good reference for electroporation in other protists, in particular other Perkinsozoa parasites and core dinoflagellates.

Indexed as

ApicomplexaDinoflagellidaOstreidaeParasitesAnimalsElectroporation

Identifiers

PMID36411330
PMCPMC9678886
OpenAlexW4309659969

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.