Evidence map›Paper›PMID 36407496›Full record

ArticleInternational journal of veterinary science and medicine2022

A study of viral pathogens in bat species in the Iberian Peninsula: identification of new coronavirus genetic variants.

Alberto Moraga-Fernández, Marta Sánchez-Sánchez, João Queirós, Ana M Lopes, Joaquín Vicente, Xosé Pardavila, Jorge Sereno-Cadierno, Paulo C Alves, José de la Fuente, Isabel G Fernández de Mera

Open access · goldAbstract read
In one paragraph

Article in International journal of veterinary science and medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Alberto Moraga-FernándezInstitute for Game and Wildlife Research, IREC (CSIC-UCLM-JCCM), SaBio Research Group, Ciudad Real, Spain.ORCID https://orcid.org/0000-0002-6303-2937
Marta Sánchez-SánchezInstitute for Game and Wildlife Research, IREC (CSIC-UCLM-JCCM), SaBio Research Group, Ciudad Real, Spain.ORCID https://orcid.org/0000-0002-1114-6334
João QueirósCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal.ORCID https://orcid.org/0000-0002-3633-7217
Ana M LopesCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal.ORCID https://orcid.org/0000-0002-7176-0969
Joaquín VicenteInstitute for Game and Wildlife Research, IREC (CSIC-UCLM-JCCM), SaBio Research Group, Ciudad Real, Spain.ORCID https://orcid.org/0000-0001-8416-3672
Xosé PardavilaSorex, Ecoloxía e Medio Ambiente S.L., Santiago de Compostela. A Coruña, Spain.ORCID https://orcid.org/0000-0001-9772-0052
Jorge Sereno-CadiernoInstitute for Game and Wildlife Research, IREC (CSIC-UCLM-JCCM), SaBio Research Group, Ciudad Real, Spain.ORCID https://orcid.org/0000-0001-5825-2268
Paulo C AlvesCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal.ORCID https://orcid.org/0000-0003-4797-0939
José de la FuenteInstitute for Game and Wildlife Research, IREC (CSIC-UCLM-JCCM), SaBio Research Group, Ciudad Real, Spain.ORCID https://orcid.org/0000-0001-7383-9649
Isabel G Fernández de MeraInstitute for Game and Wildlife Research, IREC (CSIC-UCLM-JCCM), SaBio Research Group, Ciudad Real, Spain.ORCID https://orcid.org/0000-0001-5936-4018
Instituto de Investigación en Recursos Cinegéticos · ESUniversidade do Porto · PTOklahoma State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bats have long been associated with multiple pathogens, including viruses affecting humans such as henipaviruses, filoviruses, bunyaviruses and coronaviruses. The alpha and beta coronaviruses genera can infect most mammalian species. Among them, betacoronavirus SARS-CoV, MERS-CoV and SARS-CoV-2, which have caused the three major pandemics in the last two decades, have been proposed to originate in bats. In this study, 194 oral swabs from 22 bats species sampled in 19 locations of the Iberian Peninsula were analysed and characterized by three different PCR tests (coronavirus generic real-time RT-PCR, multiplex conventional PCR, and SARS-CoV-2 specific real-time RT-PCR) to detect bat coronaviruses. Screening with coronavirus generic PCR showed 102 positives out of 194 oral swabs analysed. Then, metabarcoding with multiplex PCR amplified 15 positive samples. Most of the coronaviruses detected in this study belong to alphacoronavirus (α-CoV) genus, with multiple alphacoronaviruses identified by up to five different genetic variants coexisting in the same bat. One of the positive samples identified in a

Indexed as

Batscoronavirusemerging pathogensSARS-CoV-2wildlifezoonosis

Identifiers

PMID36407496
PMCPMC9639555
OpenAlexW4308485257

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.