Evidence map›Paper›PMID 36406953›Full record

ArticleTalanta open2022

A sample-to-answer COVID-19 diagnostic device based on immiscible filtration and CRISPR-Cas12a-assisted detection.

Bongkot Ngamsom, Alexander Iles, Moses Kamita, Racheal Kimani, Patrick Wakaba, Pablo Rodriguez-Mateos, Mary Mungai, Charlotte E Dyer, Cheryl Walter, Jesse Gitaka and 1 more

Open access · goldAbstract read
In one paragraph

Article in Talanta open, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Bongkot NgamsomSchool of Natural Sciences, University of Hull, Hull HU6 7RX, UK.
Alexander IlesSchool of Natural Sciences, University of Hull, Hull HU6 7RX, UK.
Moses KamitaDirectorate of Research and Innovation, Mount Kenya University, Thika, Kenya.
Racheal KimaniDirectorate of Research and Innovation, Mount Kenya University, Thika, Kenya.
Patrick WakabaDirectorate of Research and Innovation, Mount Kenya University, Thika, Kenya.
Pablo Rodriguez-MateosDepartment of Materials and Environmental Chemistry, Stockholm University, SE 106 91, Sweden.
Mary MungaiCentre for Virus Research, Kenya Medical Research Institute, Nairobi, Kenya.
Charlotte E DyerCentre for Biomedicine, Hull-York Medical School, University of Hull, Hull HU6 7RX, UK.
Cheryl WalterCentre for Biomedicine, Hull-York Medical School, University of Hull, Hull HU6 7RX, UK.
Jesse GitakaDirectorate of Research and Innovation, Mount Kenya University, Thika, Kenya.
Nicole PammeSchool of Natural Sciences, University of Hull, Hull HU6 7RX, UK.
Mount Kenya University · KEStockholm University · SEUniversity of Hull · GBKenya Medical Research Institute · KE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In response to the ongoing coronavirus disease 2019 (COVID-19) pandemic and disparities of vaccination coverage in low-and middle-income countries, it is vital to adopt a widespread testing and screening programme, combined with contact tracing, to monitor and effectively control the infection dispersion in areas where medical resources are limited. This work presents a lab-on-a-chip device, namely 'IFAST-LAMP-CRISPR', as an affordable, rapid and high-precision molecular diagnostic means for detection of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2). The herein proposed 'sample-to-answer' platform integrates RNA extraction, amplification and molecular detection with lateral flow readout in one device. The microscale dimensions of the device containing immiscible liquids, coupled with the use of silica paramagnetic beads and guanidine hydrochloride, streamline sample preparation (including RNA extraction, concentration and purification) in 15 min with minimal hands-on steps. The pre-amplification in combination with CRISPR-Cas12a detection assays targeting the nucleoprotein (N) gene achieved visual identification of ≥ 470 copies mL

Indexed as

COVID-19CRISPR-CasDiagnosticsImmiscible filtrationPoint-of-careSARS-CoV-2

Identifiers

PMID36406953
PMCPMC9640297
OpenAlexW4308568262

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.