Evidence map›Paper›PMID 36406053›Full record

ArticlePlant direct2020

The commitment of barley microspores into embryogenesis correlates with miRNA-directed regulation of members of the SPL, GRF and HD-ZIPIII transcription factor families.

Sébastien Bélanger, Patricia Baldrich, Marc-André Lemay, Suzanne Marchand, Patricio Esteves, Blake C Meyers, François Belzile

Open access · goldAbstract read
In one paragraph

Article in Plant direct, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Sébastien BélangerDépartement de phytologie and Institut de biologie intégrative et des systèmes Université Laval Québec City Québec Canada.ORCID https://orcid.org/0000-0002-6755-8207
Patricia BaldrichDonald Danforth Plant Science Center St. Louis MO USA.ORCID https://orcid.org/0000-0003-4669-6632
Marc-André LemayDépartement de phytologie and Institut de biologie intégrative et des systèmes Université Laval Québec City Québec Canada.ORCID https://orcid.org/0000-0003-2484-8447
Suzanne MarchandDépartement de phytologie and Institut de biologie intégrative et des systèmes Université Laval Québec City Québec Canada.
Patricio EstevesDépartement de phytologie and Institut de biologie intégrative et des systèmes Université Laval Québec City Québec Canada.
Blake C MeyersDonald Danforth Plant Science Center St. Louis MO USA.ORCID https://orcid.org/0000-0003-3436-6097
François BelzileDépartement de phytologie and Institut de biologie intégrative et des systèmes Université Laval Québec City Québec Canada.ORCID https://orcid.org/0000-0001-6893-4529
Université Laval · CADonald Danforth Plant Science Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microspore embryogenesis is a model for developmental plasticity and cell fate decisions. To investigate the role of miRNAs in this development, we sequenced sRNAs and the degradome of barley microspores collected prior to (day 0) and after (days 2 and 5) the application of a stress treatment known to induce embryogenesis. Microspores isolated at these timepoints were uniform in both appearance and in their complements of sRNAs. We detected 68 miRNAs in microspores. The abundance of 51 of these miRNAs differed significantly during microspore development. One group of miRNAs was induced when the stress treatment was applied, prior to being repressed when microspores transitioned to embryogenesis. Another group of miRNAs were up-regulated in day-2 microspores and their abundance remained stable or increased in day-5 microspores, a timepoint at which the first clear indications of the transition toward embryogenesis were visible. Collectively, these miRNAs might play a role in the modulation of the stress response, the repression of gametic development, and/or the gain of embryogenic potential. A degradome analysis allowed us to validate the role of miRNAs in regulating 41 specific transcripts. We showed that the transition of microspores toward the embryogenesis pathway involves miRNA-directed regulation of members of the

Indexed as

degradomegametic embryogenesishc‐siRNAHordeum vulgaremiRNAphasiRNA

Identifiers

PMID36406053
PMCPMC9671080
OpenAlexW3112404639

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.