Evidence map›Paper›PMID 36402136›Full record

ArticleCurrent biology : CB2022

Visual object detection biases escape trajectories following acoustic startle in larval zebrafish.

Hanna Zwaka, Olivia J McGinnis, Paula Pflitsch, Srishti Prabha, Vikash Mansinghka, Florian Engert, Andrew D Bolton

Open access · hybridAbstract readVideo-Audio Media
In one paragraph

Article in Current biology : CB, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Hanna ZwakaDepartment of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.
Olivia J McGinnisDepartment of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.
Paula PflitschDepartment of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.
Srishti PrabhaDepartment of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.
Vikash MansinghkaDepartment of Brain and Cognitive Sciences, MIT, Cambridge, MA 02142, USA.
Florian EngertDepartment of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.
Andrew D BoltonDepartment of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA; Department of Brain and Cognitive Sciences, MIT, Cambridge, MA 02142, USA. Electronic address: andrewdbolton@gmail.com.
Harvard University · USMassachusetts Institute of Technology · USMcGovern Institute for Brain Research · US

Funding

Zooming into the fish's brain-What is really going on! Connectomics analysis of larval zebrafish.U19NS104653 · NINDS · HARVARD UNIVERSITY · PI MARK C FISHMAN · 2017 to 2026
$39.4M
NINDS NIH HHS U19 NS104653
6 · The paper itself

Abstract

In this study, we investigated whether the larval zebrafish is sensitive to the presence of obstacles in its environment. Zebrafish execute fast escape swims when in danger of predation. We posited that collisions with solid objects during escape would be maladaptive to the fish, and therefore, the direction of escape swims should be informed by the locations of barriers. To test this idea, we developed a closed-loop imaging rig outfitted with barriers of various qualities. We show that when larval zebrafish escape in response to a non-directional vibrational stimulus, they use visual scene information to avoid collisions with obstacles. Our study demonstrates that barrier avoidance rate corresponds to the absolute distance of obstacles, as distant barriers outside of collision range elicit less bias than nearby collidable barriers that occupy the same amount of visual field. The computation of barrier avoidance is covert: the fact that fish will avoid barriers during escape cannot be predicted by its routine swimming behavior in the barrier arena. Finally, two-photon laser ablation experiments suggest that excitatory bias is provided to the Mauthner cell ipsilateral to approached barriers, either via direct excitation or a multi-step modulation process. We ultimately propose that zebrafish detect collidable objects via an integrative visual computation that is more complex than retinal occupancy alone, laying a groundwork for understanding how cognitive physical models observed in humans are implemented in an archetypal vertebrate brain. VIDEO ABSTRACT.

Indexed as

AcousticsZebrafishAnimalsHumansLarvaSwimmingBrainstem Escape Networkdepth perceptionintuitive physicsMauthnerobject perceptionpredator escapezebrafish

Identifiers

PMID36402136
PMCPMC10028558
OpenAlexW4309438001

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.