Evidence map›Paper›PMID 36401214›Full record

ArticleBMC medical research methodology2022

Using joint models to study the association between CD4 count and the risk of death in TB/HIV data.

Nobuhle N Mchunu, Henry G Mwambi, Dimitris Rizopoulos, Tarylee Reddy, Nonhlanhla Yende-Zuma

Abstract read
In one paragraph

Article in BMC medical research methodology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Joint modeling of longitudinal CD4 count data and time to first occurrence of composite outcome.Journal of clinical tuberculosis and other mycobacterial diseases · 2024
    Article
  5. Article
  6. Article
  7. CD4Open life sciences · 2023
    Article
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nobuhle N MchunuBiostatistics Unit, South African Medical Research Council (SAMRC), SAMRC Building, 491 Peter Mokaba Ridge Road, Durban, 4041, South Africa. Nobuhle.mchunu@mrc.ac.za.
Henry G MwambiUniversity of KwaZulu-Natal, School of Mathematics, Statistics and Computer Science, King Edward Avenue, Pietermaritzburg, 3209, South Africa.
Dimitris RizopoulosDepartment of Biostatistics, Erasmus University Medical Center, Rotterdam, CE, 3000, The Netherlands.
Tarylee ReddyBiostatistics Unit, South African Medical Research Council (SAMRC), SAMRC Building, 491 Peter Mokaba Ridge Road, Durban, 4041, South Africa.
Nonhlanhla Yende-ZumaCentre for the AIDS Programme of Research in South Africa (CAPRISA), University of KwaZulu-Natal, 719 Umbilo Road, Durban, 4041, South Africa.

Funding

Wellcome Trust
6 · The paper itself

Abstract

backgroundThe association structure linking the longitudinal and survival sub-models is of fundamental importance in the joint modeling framework and the choice of this structure should be made based on the clinical background of the study. However, this information may not always be accessible and rationale for selecting this association structure has received relatively little attention in the literature. To this end, we aim to explore four alternative functional forms of the association structure between the CD4 count and the risk of death and provide rationale for selecting the optimal association structure for our data. We also aim to compare the results obtained from the joint model to those obtained from the time-varying Cox model.

methodsWe used data from the Centre for the AIDS Programme of Research in South Africa (CAPRISA) AIDS Treatment programme, the Starting Antiretroviral Therapy at Three Points in Tuberculosis (SAPiT) study, an open-label, three armed randomised, controlled trial between June 2005 and July 2010 (N=642). In our analysis, we combined the early and late integrated arms and compared results to the sequential arm. We utilized the Deviance Information Criterion (DIC) to select the final model with the best structure, with smaller values indicating better model adjustments to the data.

resultsPatient characteristics were similar across the study arms. Combined integrated therapy arms had a reduction of 55% in mortality (HR:0.45, 95% CI:0.28-0.72) compared to the sequential therapy arm. The joint model with a cumulative effects functional form was chosen as the best association structure. In particular, our joint model found that the area under the longitudinal profile of CD4 count was strongly associated with a 21% reduction in mortality (HR:0.79, 95% CI:0.72-0.86). Where as results from the time-varying Cox model showed a 19% reduction in mortality (HR:0.81, 95% CI:0.77-0.84).

conclusionsIn this paper we have shown that the "current value" association structure is not always the best structure that expresses the correct relationship between the outcomes in all settings, which is why it is crucial to explore alternative clinically meaningful association structures that links the longitudinal and survival processes.

Indexed as

Acquired Immunodeficiency SyndromeHIV InfectionsTuberculosisCD4 Lymphocyte CountHumansProportional Hazards ModelsAssociation structuresCD4 countJoint modelsLongitudinal dataMortalityTime-to-event data

Identifiers

PMID36401214
PMCPMC9675185

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.