Evidence map›Paper›PMID 36401157›Full record

ArticleBMC plant biology2022

Genome-wide association study and genetic mapping of BhWAX conferring mature fruit cuticular wax in wax gourd.

Jinqiang Yan, Feng Chen, Piaoyun Sun, Wenrui Liu, Dasen Xie, Yulei Qian, Biao Jiang

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jinqiang YanVegetable Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, Guangdong, China.
Feng ChenGuangdong Key Laboratory for New Technology Research of Vegetables, Guangzhou, 510640, Guangdong, China.
Piaoyun SunGuangdong Key Laboratory for New Technology Research of Vegetables, Guangzhou, 510640, Guangdong, China.
Wenrui LiuVegetable Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, Guangdong, China.
Dasen XieVegetable Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, Guangdong, China.
Yulei QianGuangdong Key Laboratory for New Technology Research of Vegetables, Guangzhou, 510640, Guangdong, China.
Biao JiangVegetable Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, Guangdong, China. jiangbiao@gdaas.cn.ORCID http://orcid.org/0000-0002-8963-9120
Key Laboratory of Guangdong Province · CN

Funding

Basic and Applied Basic Research Foundation of Guangdong Province 2020A1515111138Discipline team construction project of Guangdong Academy of Agricultural Sciences 202114TDNatural Science Foundation of China 31972403Natural Science Foundation of China 32102406Special fund for scientific and technological talents introduction of Guangdong Academy of Agricultural Sciences R2021YJ-YB2004Training plan for young and middle-aged discipline leaders of Guangdong Academy of Agricultural Sciences R2020PY-JG003
6 · The paper itself

Abstract

backgroundWax gourd [Benincasa hispida (Thunb) Cogn. (2n = 2x = 24)] is an economically important vegetable crop of genus Benincasa in the Cucurbitaceae family. Fruit is the main consumption organ of wax gourd. The mature fruit cuticular wax (MFCW) is an important trait in breeding programs, which is also of evolutionary significance in wax gourd. However, the genetic architecture of this valuable trait remains unrevealed.

resultsIn this study, genetic analysis revealed that the inheritance of MFCW was controlled by a single gene, with MFCW dominant over non-MFCW, and the gene was primarily named as BhWAX. Genome-wide association study (GWAS) highlighted a 1.1 Mb interval on chromosome 9 associated with MFCW in wax gourd germplasm resources. Traditional fine genetic mapping delimited BhWAX to a 0.5 Mb region containing 12 genes. Based on the gene annotation, expression analysis and co-segregation analysis, Bhi09G001428 that encodes a membrane bound O-acyltransferase (MBOAT) was proposed as the candidate gene for BhWAX. Moreover, it was demonstrated that the efficiency of a cleaved amplified polymorphic sequences (CAPS) marker in the determination of MFCW in wax gourd reached 80%.

conclusionsIn closing, the study identified the candidate gene controlling MFCW and provided an efficient molecular marker for the trait in wax gourd for the first time, which will not only be beneficial for functional validation of the gene and marker-assisted breeding of wax gourd, but also lay a foundation for analysis of its evolutionary meaning among cucurbits.

Indexed as

CucurbitaceaeGenome-Wide Association StudyChromosome MappingFruitPlant BreedingVegetablesWaxesWaxesCuticular waxFruitGenetic mappingGWASMBOATWax gourd

Identifiers

PMID36401157
PMCPMC9675113
OpenAlexW4309563199

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.