Evidence map›Paper›PMID 36400799›Full record

ArticleNPJ biofilms and microbiomes2022

Implications of oral streptococcal bacteriophages in autism spectrum disorder.

Zhan Tong, Xin Zhou, Yanan Chu, Tianxu Zhang, Jie Zhang, Xiaoyan Zhao, Zuqun Wang, Rui Ding, Qingren Meng, Jun Yu and 2 more

Open access · goldAbstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 2 pooled it
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 2 syntheses or guidelines pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Microbiota in Autism Spectrum Disorder: A Systematic Review.International journal of molecular sciences · 2023
    Pooled it
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. SVep1, a temperate phage of human oral commensalFrontiers in microbiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Zhan Tong *Beijing Institute of Genomics, Chinese Academy of Sciences/China National Center for Bioinformation, Beijing, 100101, China.
Xin Zhou *Department of Biomedical Informatics, School of Basic Medical Sciences, Peking University, Beijing, 100191, China.
Yanan Chu *Beijing Institute of Genomics, Chinese Academy of Sciences/China National Center for Bioinformation, Beijing, 100101, China.ORCID 0000-0002-9349-4307
Tianxu ZhangDepartment of Biomedical Informatics, School of Basic Medical Sciences, Peking University, Beijing, 100191, China.
Jie ZhangDepartment of child healthcare, Xi'an Children's Hospital, Xi'an, 710003, China.
Xiaoyan ZhaoDepartment of child healthcare, Xi'an Children's Hospital, Xi'an, 710003, China.
Zuqun WangDepartment of Biomedical Informatics, School of Basic Medical Sciences, Peking University, Beijing, 100191, China.
Rui DingDepartment of Biomedical Informatics, School of Basic Medical Sciences, Peking University, Beijing, 100191, China.
Qingren MengSchool of Medicine, Southern University of Science and Technology, Shenzhen, 518055, China.
Jun YuUniversity of Chinese Academy of Sciences, Beijing, 100190, China.
Juan WangDepartment of Biomedical Informatics, School of Basic Medical Sciences, Peking University, Beijing, 100191, China. wjuan@hsc.pku.edu.cn.ORCID 0000-0002-3111-9130
Yu KangBeijing Institute of Genomics, Chinese Academy of Sciences/China National Center for Bioinformation, Beijing, 100101, China. kangy@big.ac.cn.ORCID 0000-0001-5196-0376
Peking University · CNChinese Academy of Sciences · CNXi’an Children’s Hospital · CNSouthern University of Science and Technology · CNUniversity of Chinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Growing evidence suggests altered oral and gut microbiota in autism spectrum disorder (ASD), but little is known about the alterations and roles of phages, especially within the oral microbiota in ASD subjects. We enrolled ASD (n = 26) and neurotypical subjects (n = 26) with their oral hygiene controlled, and the metagenomes of both oral and fecal samples (n = 104) are shotgun-sequenced and compared. We observe extensive and diverse oral phageome comparable to that of the gut, and clear signals of mouth-to-gut phage strain transfer within individuals. However, the overall phageomes of the two sites are widely different and show even less similarity in the oral communities between ASD and control subjects. The ASD oral phageome exhibits significantly reduced abundance and alpha diversity, but the Streptococcal phages there are atypically enriched, often dominating the community. The over-representation of Streptococcal phages is accompanied by enriched oral Streptococcal virulence factors and Streptococcus bacteria, all exhibiting a positive correlation with the severity of ASD clinical manifestations. These changes are not observed in the parallel sampling of the gut flora, suggesting a previously unknown oral-specific association between the excessive Streptococcal phage enrichment and ASD pathogenesis. The findings provide new evidence for the independent microbiome-mouth-brain connection, deepen our understanding of how the growth dynamics of bacteriophages and oral microbiota contribute to ASD, and point to novel effective therapeutics.

Indexed as

Autism Spectrum DisorderBacteriophagesGastrointestinal MicrobiomeStreptococcus PhagesHumansMouth

Identifiers

PMID36400799
PMCPMC9674646
OpenAlexW4309564543

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.