Evidence map›Paper›PMID 36399499›Full record

ArticleNucleic acids research2023

The next-generation Open Targets Platform: reimagined, redesigned, rebuilt.

David Ochoa, Andrew Hercules, Miguel Carmona, Daniel Suveges, Jarrod Baker, Cinzia Malangone, Irene Lopez, Alfredo Miranda, Carlos Cruz-Castillo, Luca Fumis and 24 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 251 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
251citing papers in PubMed, 6 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

251 citing papers in PubMed, 6 syntheses or guidelines pooled it.

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  7. Article
  8. LncRNA H19 promotes vascular remodeling by inhibiting MFN2.Functional & integrative genomics · 2026
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191 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors.

David OchoaOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.ORCID 0000-0003-1857-278X
Andrew HerculesOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Miguel CarmonaOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Daniel SuvegesOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Jarrod BakerOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Cinzia MalangoneOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Irene LopezOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Alfredo MirandaOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Carlos Cruz-CastilloOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Luca FumisOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Manuel Bernal-LlinaresOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.ORCID 0000-0002-7368-180X
Kirill TsukanovOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Helena CornuOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Konstantinos TsirigosOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Olesya RazuvayevskayaOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Annalisa BunielloOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.ORCID 0000-0002-4623-8642
Jeremy SchwartzentruberOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Mohd KarimOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Bruno ArianoOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Ricardo Esteban Martinez OsorioOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Javier FerrerOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Xiangyu GeOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Sandra Machlitt-NorthenGlaxoSmithKline plc, GSK Medicines Research Centre, Gunnels Wood Road, Stevenage, SG1 2NY, UK.
Asier Gonzalez-UriarteOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Shyamasree SahaEuropean Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Santosh TirunagariEuropean Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Chintan MehtaOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Juan María Roldán-RomeroOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Stuart HorswellOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Sarah YoungOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Maya GhoussainiOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
David G HulcoopOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.
Ian DunhamOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.ORCID 0000-0003-2525-5598
Ellen M McDonaghOpen Targets, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK.ORCID 0000-0001-5806-6174

Funding

Wellcome Trust 206194
6 · The paper itself

Abstract

The Open Targets Platform (https://platform.opentargets.org/) is an open source resource to systematically assist drug target identification and prioritisation using publicly available data. Since our last update, we have reimagined, redesigned, and rebuilt the Platform in order to streamline data integration and harmonisation, expand the ways in which users can explore the data, and improve the user experience. The gene-disease causal evidence has been enhanced and expanded to better capture disease causality across rare, common, and somatic diseases. For target and drug annotations, we have incorporated new features that help assess target safety and tractability, including genetic constraint, PROTACtability assessments, and AlphaFold structure predictions. We have also introduced new machine learning applications for knowledge extraction from the published literature, clinical trial information, and drug labels. The new technologies and frameworks introduced since the last update will ease the introduction of new features and the creation of separate instances of the Platform adapted to user requirements. Our new Community forum, expanded training materials, and outreach programme support our users in a range of use cases.

Identifiers

PMID36399499
PMCPMC9825572

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.