Evidence map›Paper›PMID 36397687›Full record

ArticleAnimal bioscience2023

Novel polymorphisms of dopa decarboxylase gene and their association with lamb quality traits in Indonesian sheep.

Ratna Sholatia Harahap, Ronny Rachman Noor, Yuni Cahya Endrawati, Huda Shalahudin Darusman, Asep Gunawan

Open access · goldAbstract read
In one paragraph

Article in Animal bioscience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ratna Sholatia HarahapGraduate School of Animal Production and Technology, Faculty of Animal Science, IPB University, Kampus IPB Darmaga Bogor 16680, Indonesia.
Ronny Rachman NoorDepartment of Animal Production and Technology, Faculty of Animal Science, IPB University, Kampus IPB Darmaga Bogor 16680, Indonesia.
Yuni Cahya EndrawatiDepartment of Animal Production and Technology, Faculty of Animal Science, IPB University, Kampus IPB Darmaga Bogor 16680, Indonesia.
Huda Shalahudin DarusmanDepartment of Anatomy Physiology and Pharmacology, Faculty of Veterinary Medicine, IPB University, Kampus IPB Darmaga Bogor 16680, Indonesia.
Asep GunawanDepartment of Animal Production and Technology, Faculty of Animal Science, IPB University, Kampus IPB Darmaga Bogor 16680, Indonesia.
IPB University · ID

Funding

Directorate General of Resources for Science, Technology and Higher Education, Ministry of Research, Technology and Higher Education 001/E5/PG.02.00PT/2022
6 · The paper itself

Abstract

objectiveThis study aimed to investigate the polymorphisms of the dopa decarboxylase (DDC) gene and association analysis with lamb quality and expression quantification of the DDC gene in phenotypically divergent Indonesian sheep.

methodsThe totals of 189 rams with an average body weight of 24.12 kg at 10 to 12 months were used to identify DDC gene polymorphism using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). Among 189 rams, several rams representing various sheep genotypes were used for an association study between genotypes and phenotypic traits with proc general linear model (GLM) analysis. In addition, the gene expression analysis of the DDC mRNA in the phenotypically divergent sheep population was analyzed using quantitative reverse-transcription PCR.

resultsThe DDC gene (g. 5377439 G>A) showed polymorphisms that indicated three genotypes: AA, AG, and GG. The DDC gene polymorphism was significantly associated (p≤0.05) with carcass characteristics including carcass percentage, carcass length, hot and cold carcass; physical properties of lamb quality including pH value; retail cut carcass; fatty acid composition such as fat content, pentadecanoic acid (C15:0), tricosylic acid (C23:0), lignoceric acid (C24:0), oleic acid (C18:1n9c), elaidic acid (C18:1n9t), nervonic acid (C24:1), linoleic acid (C18:2n6c), arachidonic acid (C20:4n6), cervonic acid (C22:6n3); and mineral content including potassium (K). The GG genotype of the DDC gene had the best association with lamb quality traits. The DDC gene expression analysis mRNA showed no significant difference (p≥0.05) between lamb quality traits.

conclusionThe DDC gene could be used as a potential candidate gene to improve lamb quality.

Indexed as

Carcass CharacteristicsDopa Decarboxylase (DDC) GeneFatty Acid CompositionLamb QualityRetail Meat Cut

Identifiers

PMID36397687
PMCPMC10164533
OpenAlexW4309043347

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.