Evidence map›Paper›PMID 36397160›Full record

ArticleBiotechnology for biofuels and bioproducts2022

Precursor prioritization for p-cymene production through synergistic integration of biology and chemistry.

Hsi-Hsin Lin, Daniel Mendez-Perez, Jimin Park, Xi Wang, Yan Cheng, Jiajie Huo, Aindrila Mukhopadhyay, Taek Soon Lee, Brent H Shanks

Open access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels and bioproducts, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. High-level biosynthesis of enantiopure germacrene D in yeast.Applied microbiology and biotechnology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Hsi-Hsin Lin *Department of Chemical and Biological Engineering, Iowa State University, Ames, IA, 50011, USA.
Daniel Mendez-Perez *Joint BioEnergy Institute, 5885 Hollis Street, Emeryville, CA, 94608, USA.
Jimin ParkJoint BioEnergy Institute, 5885 Hollis Street, Emeryville, CA, 94608, USA.
Xi WangJoint BioEnergy Institute, 5885 Hollis Street, Emeryville, CA, 94608, USA.
Yan ChengDepartment of Chemical and Biological Engineering, Iowa State University, Ames, IA, 50011, USA.
Jiajie HuoDepartment of Chemical and Biological Engineering, Iowa State University, Ames, IA, 50011, USA.
Aindrila MukhopadhyayJoint BioEnergy Institute, 5885 Hollis Street, Emeryville, CA, 94608, USA.
Taek Soon LeeJoint BioEnergy Institute, 5885 Hollis Street, Emeryville, CA, 94608, USA. tslee@lbl.gov.
Brent H ShanksDepartment of Chemical and Biological Engineering, Iowa State University, Ames, IA, 50011, USA. bshanks@iastate.edu.
Joint BioEnergy Institute · USIowa State University · USLawrence Berkeley National Laboratory · US

Funding

U.S. Department of Energy DE-AC02-05CH11231
6 · The paper itself

Abstract

The strategy of synergistic application of biological and chemical catalysis is an important approach for efficiently converting renewable biomass into chemicals and fuels. In particular, the method of determining the appropriate intermediate between the two catalytic methods is critical. In this work, we demonstrate p-cymene production through the integration of biosynthesis and heterogenous catalysis and show how a preferred biologically derived precursor could be determined. On the biological side, we performed the limonene and 1,8-cineole production through the mevalonate pathway. Titers of 0.605 g/L and a 1.052 g/L were achieved, respectively. This difference is in agreement with the toxicity of these compounds toward the producing microorganisms, which has implications for subsequent development of the microbial platform. On the heterogeneous catalysis side, we performed the reaction with both biological precursors to allow for direct comparison. Using hydrogenation/dehydrogenation metals on supports with acid sites, both limonene and 1,8-cineole were converted to p-cymene with similar yields under equivalent reaction conditions. Thus, we could determine that the most promising strategy would be to target 1,8-cineole, the higher titer and lower toxicity bio-derived precursor with subsequent catalytic conversion to p-cymene. We further optimized the biological production of 1,8-cineole via fed-batch fermentation and reached the titer of 4.37 g/L which is the highest known 1,8-cineole titer from microbial production. This work provides a valuable paradigm for early stage considerations to determine the best route for the high-efficiency production of a target biobased molecule using an integration of biology and chemistry.

Indexed as

1,8-CineoleChemistry/biology integrationDehydrogenationFermentationLimonenep-Cymene

Identifiers

PMID36397160
PMCPMC9670573
OpenAlexW4309466946

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.