Evidence map›Paper›PMID 36396635›Full record

ArticleNature communications2022

CHD7 regulates otic lineage specification and hair cell differentiation in human inner ear organoids.

Jing Nie, Yoshitomo Ueda, Alexander J Solivais, Eri Hashino

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 43 citations in OpenAlex.

  1. Functionalized Biomimetic Scaffolds for Human-Derived Auditory Neural Circuit Construction.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Role of CHD chromatin remodelers in heart development.World journal of pediatrics : WJP · 2026
    Review
  3. Article
  4. Recent Progress in Mechanism-Based Therapies forInternational journal of molecular sciences · 2026
    Review
  5. Review
  6. Review
  7. Review
  8. Review
  9. Review
  10. Article
  11. Review
  12. Review
  13. Metabolic Profiling of Cochlear Organoids Identifies α-Ketoglutarate and NADAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  14. Review
  15. Genes · 2024
    Article
  16. Article
  17. Article
  18. Inner Ear Organoids: Strengths and Limitations.Journal of the Association for Research in Otolaryngology : JARO · 2024
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jing NieDepartment of Otolaryngology-Head and Neck Surgery, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.ORCID 0000-0002-7141-1830
Yoshitomo UedaDepartment of Otolaryngology-Head and Neck Surgery, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.ORCID 0000-0001-7655-6898
Alexander J SolivaisDepartment of Otolaryngology-Head and Neck Surgery, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.
Eri HashinoDepartment of Otolaryngology-Head and Neck Surgery, Indiana University School of Medicine, Indianapolis, IN, 46202, USA. ehashino@iu.edu.ORCID 0000-0002-8359-5788
Indiana University School of Medicine

Funding

Modeling Inner Ear Differentiation with Pluripotent Stem CellsR01DC013294 · NIDCD · INDIANA UNIVERSITY INDIANAPOLIS · PI Eri Hashino · 2014 to 2026
$7.1M
Modeling Genetic Inner Ear Disorders with Human Pluripotent Stem CellsR01DC015788 · NIDCD · INDIANA UNIVERSITY INDIANAPOLIS · PI HASHINO, ERI · 2017 to 2021
$3.3M
Generation of human inner ear organoids via genetic programmingR21DC020160 · NIDCD · INDIANA UNIVERSITY INDIANAPOLIS · PI NIE, JING · 2022 to 2022
$125k
NIDCD NIH HHS R01 DC013294NIDCD NIH HHS R01 DC015788NIDCD NIH HHS R21 DC020160U.S. Department of Health & Human Services | NIH | National Institute on Deafness and Other Communication Disorders (NIDCD) R01DC013294U.S. Department of Health & Human Services | NIH | National Institute on Deafness and Other Communication Disorders (NIDCD) R01DC015788U.S. Department of Health & Human Services | NIH | National Institute on Deafness and Other Communication Disorders (NIDCD) R21DC020160
6 · The paper itself

Abstract

Mutations in CHD7 cause CHARGE syndrome, affecting multiple organs including the inner ear in humans. We investigate how CHD7 mutations affect inner ear development using human pluripotent stem cell-derived organoids as a model system. We find that loss of CHD7 or its chromatin remodeling activity leads to complete absence of hair cells and supporting cells, which can be explained by dysregulation of key otic development-associated genes in mutant otic progenitors. Further analysis of the mutant otic progenitors suggests that CHD7 can regulate otic genes through a chromatin remodeling-independent mechanism. Results from transcriptome profiling of hair cells reveal disruption of deafness gene expression as a potential underlying mechanism of CHARGE-associated sensorineural hearing loss. Notably, co-differentiating CHD7 knockout and wild-type cells in chimeric organoids partially rescues mutant phenotypes by restoring otherwise severely dysregulated otic genes. Taken together, our results suggest that CHD7 plays a critical role in regulating human otic lineage specification and hair cell differentiation.

Indexed as

CHARGE SyndromeEar, InnerDNA-Binding ProteinsDNA HelicasesHairHumansNeurogenesisOrganoidsCHD7 protein, humanDNA-Binding ProteinsDNA Helicases

Identifiers

PMID36396635
PMCPMC9672366
OpenAlexW4309235559

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.