Evidence map›Paper›PMID 36394321›Full record

ArticlemSphere2022

Species-Specific Patterns of Gut Metabolic Modules in Dutch Individuals with Different Dietary Habits.

Sudarshan A Shetty, Paul B Stege, Joost Hordijk, Esther Gijsbers, Cindy M Dierikx, Engeline van Duijkeren, Eelco Franz, Rob J L Willems, Fernanda L Paganelli, Susana Fuentes

Abstract read
In one paragraph

Article in mSphere, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Sudarshan A ShettyCentre for Infectious Disease Control, National Institute for Public Health and the Environmentgrid.31147.30 (RIVM), Bilthoven, The Netherlands.ORCID 0000-0001-7280-9915
Paul B StegeDepartment of Medical Microbiology, UMC Utrecht, Utrecht, The Netherlands.
Joost HordijkCentre for Infectious Disease Control, National Institute for Public Health and the Environmentgrid.31147.30 (RIVM), Bilthoven, The Netherlands.
Esther GijsbersCentre for Infectious Disease Control, National Institute for Public Health and the Environmentgrid.31147.30 (RIVM), Bilthoven, The Netherlands.
Cindy M DierikxCentre for Infectious Disease Control, National Institute for Public Health and the Environmentgrid.31147.30 (RIVM), Bilthoven, The Netherlands.
Engeline van DuijkerenCentre for Infectious Disease Control, National Institute for Public Health and the Environmentgrid.31147.30 (RIVM), Bilthoven, The Netherlands.
Eelco FranzCentre for Infectious Disease Control, National Institute for Public Health and the Environmentgrid.31147.30 (RIVM), Bilthoven, The Netherlands.
Rob J L WillemsDepartment of Medical Microbiology, UMC Utrecht, Utrecht, The Netherlands.
Fernanda L PaganelliDepartment of Medical Microbiology, UMC Utrecht, Utrecht, The Netherlands.
Susana FuentesCentre for Infectious Disease Control, National Institute for Public Health and the Environmentgrid.31147.30 (RIVM), Bilthoven, The Netherlands.ORCID 0000-0002-9455-4965

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diet is an important determinant of the human gut microbiome. Here, we analyzed fecal metagenomes of Dutch adults following omnivorous, pescatarian, vegan, and vegetarian diets. We compared the taxonomic composition of individuals from our study with publicly available gut metagenomes from westernized and non-westernized societies. We observed that, despite long-term transition to diets rich in plant fibers (vegan or vegetarian), the microbiomes of these were typical of westernized populations, and similar in composition to omnivores. Although there were no major differences in metabolic modules, we identified differences in the species that contributed to particular functions, such as carbohydrate degradation and short-chain fatty acid metabolism. Overall, this study shows functional redundancy of the microbiomes among westernized populations, which is independent of long-term individual dietary habits.

Indexed as

Diet, VegetarianMicrobiotaAdultDietDiet, VeganFeeding BehaviorHumansdietmicrobiomeomnivorevegan

Identifiers

PMID36394321
PMCPMC9769759

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.