Evidence map›Paper›PMID 36393868›Full record

ArticleFrontiers in cell and developmental biology2022

Integrated proteomics and phosphoproteomics revealed druggable kinases in neoadjuvant chemotherapy resistant tongue cancer.

Irene A George, Gajanan Sathe, Vivek Ghose, Anuradha Chougule, Pratik Chandrani, Vijay Patil, Vanita Noronha, R Venkataramanan, Sewanti Limaye, Akhilesh Pandey and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Irene A GeorgeInstitute of Bioinformatics, Bangalore, India.
Gajanan SatheInstitute of Bioinformatics, Bangalore, India.
Vivek GhoseInstitute of Bioinformatics, Bangalore, India.
Anuradha ChouguleTata Memorial Hospital (TMH), Mumbai, India.
Pratik ChandraniTata Memorial Hospital (TMH), Mumbai, India.
Vijay PatilTata Memorial Hospital (TMH), Mumbai, India.
Vanita NoronhaTata Memorial Hospital (TMH), Mumbai, India.
R VenkataramananKarkinos Healthcare Pvt Ltd., Mumbai, India.
Sewanti LimayeSir H.N. Reliance Foundation Hospital and Research Centre, Mumbai, India.
Akhilesh PandeyInstitute of Bioinformatics, Bangalore, India.
Kumar PrabhashTata Memorial Hospital (TMH), Mumbai, India.
Prashant KumarInstitute of Bioinformatics, Bangalore, India.
Tata Memorial Hospital · INManipal Academy of Higher Education · INInstitute of Bioinformatics · INNational Institute of Mental Health and Neurosciences · INSir H.N. Reliance Foundation Hospital and Research Centre · INUniversity of Dundee · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tongue squamous cell carcinoma is an aggressive oral cancer with a high incidence of metastasis and poor prognosis. Most of the oral cavity cancer patients present in clinics with locally advanced unresectable tumors. Neoadjuvant treatment is beneficial for these individuals as it reduces the tumor size aiding complete resection. However, patients develop therapy resistance to the drug regimen. In this study, we explored the differential expression of proteins and altered phosphorylation in the neoadjuvant chemotherapy resistant tongue cancer patients. We integrated the proteomic and phosphoproteomic profiles of resistant (n = 4) and sensitive cohorts (n = 4) and demonstrated the differential expression and phosphorylation of proteins in the primary tissue of the respective subject groups. We observed differential and extensive phosphorylation of keratins such as KRT10 and KRT1 between the two cohorts. Furthermore, our study revealed a kinase signature associated with neoadjuvant chemotherapy resistance. Kinases such as MAPK1, AKT1, and MAPK3 are predicted to regulate the resistance in non-responders. Pathway analysis showed enrichment of Rho GTPase signaling and hyperphosphosphorylation of proteins involved in cell motility, invasion, and drug resistance. Targeting the kinases could help with the clinical management of neoadjuvant chemotherapy-resistant tongue cancer.

Indexed as

neoadjuvant chemotherapy resistancephosphoproteomeproteomerho GTPases signalingtongue cancer

Identifiers

PMID36393868
PMCPMC9651967
OpenAlexW4307703733

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.