Evidence map›Paper›PMID 36389738›Full record

ArticleFrontiers in immunology2022

A 9-mRNA signature measured from whole blood by a prototype PCR panel predicts 28-day mortality upon admission of critically ill COVID-19 patients.

Claire Tardiveau, Guillaume Monneret, Anne-Claire Lukaszewicz, Valérie Cheynet, Elisabeth Cerrato, Katia Imhoff, Estelle Peronnet, Maxime Bodinier, Louis Kreitmann, Sophie Blein and 14 more

Abstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Claire TardiveauJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Guillaume MonneretJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Anne-Claire LukaszewiczJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Valérie CheynetJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Elisabeth CerratoJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Katia ImhoffJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Estelle PeronnetJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Maxime BodinierJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Louis KreitmannJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Sophie BleinJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Jean-François LlitjosJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Filippo ContiJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Morgane GossezImmunology Laboratory, Edouard Herriot Hospital - Hospices Civils de Lyon, Lyon, France.
Marielle BuissonCentre d'Investigation Clinique de Lyon (CIC 1407 Inserm), Hospices Civils de Lyon, Lyon, France.
Hodane YonisMedical Intensive Care Department, Hospices Civils de Lyon, Croix-Rousse Hospital, Lyon, France.
Martin CourMedical Intensive Care Department, Hospices Civils de Lyon, Edouard Herriot Hospital, Lyon, France.
Laurent ArgaudMedical Intensive Care Department, Hospices Civils de Lyon, Edouard Herriot Hospital, Lyon, France.
Marie-Charlotte DelignetteAnaesthesia and Critical Care Medicine Department, Hospices Civils de Lyon, Croix-Rousse Hospital, Lyon, France.
Florent WalletMedical Intensive Care Department, Hospices Civils de Lyon, Lyon sud Hospital, Pierre-Bénite, France.
Frederic DaillerNeurological Anesthesiology and Intensive Care Department, Hospices Civils de Lyon, Pierre Wertheimer Hospital, Lyon, France.
Céline MonardAnaesthesia and Critical Care Medicine Department, Hospices Civils de Lyon, Edouard Herriot Hospital, Lyon, France.
Karen Brengel-PesceJoint Research Unit HCL-bioMérieux, Equipe d'Accueil (EA) 7426 "Pathophysiology of Injury-Induced Immunosuppression" (Université Claude Bernard Lyon 1 - Hospices Civils de Lyon, bioMérieux), Lyon, France.
Fabienne VenetImmunology Laboratory, Edouard Herriot Hospital - Hospices Civils de Lyon, Lyon, France.
RICO study group

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immune responses affiliated with COVID-19 severity have been characterized and associated with deleterious outcomes. These approaches were mainly based on research tools not usable in routine clinical practice at the bedside. We observed that a multiplex transcriptomic panel prototype termed Immune Profiling Panel (IPP) could capture the dysregulation of immune responses of ICU COVID-19 patients at admission. Nine transcripts were associated with mortality in univariate analysis and this 9-mRNA signature remained significantly associated with mortality in a multivariate analysis that included age, SOFA and Charlson scores. Using a machine learning model with these 9 mRNA, we could predict the 28-day survival status with an Area Under the Receiver Operating Curve (AUROC) of 0.764. Interestingly, adding patients' age to the model resulted in increased performance to predict the 28-day mortality (AUROC reaching 0.839). This prototype IPP demonstrated that such a tool, upon clinical/analytical validation and clearance by regulatory agencies could be used in clinical routine settings to quickly identify patients with higher risk of death requiring thus early aggressive intensive care.

Indexed as

COVID-19Critical IllnessHospitalizationHumansPolymerase Chain ReactionRNA, MessengerRNA, Messenger28-day mortality predictionimmune responsepersonalized medicineSARS-CoV-2 infectiontranscriptomic multiplex tool

Identifiers

PMID36389738
PMCPMC9665875

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.