Evidence map›Paper›PMID 36389712›Full record

ArticleFrontiers in immunology2022

MUC22, HLA-A, and HLA-DOB variants and COVID-19 in resilient super-agers from Brazil.

Erick C Castelli, Mateus V de Castro, Michel S Naslavsky, Marilia O Scliar, Nayane S B Silva, Raphaela N Pereira, Viviane A O Ciriaco, Camila F B Castro, Celso T Mendes-Junior, Etiele de S Silveira and 24 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors at 5 institutions in 1 country.

Erick C CastelliDepartment of Pathology, School of Medicine, São Paulo State University (UNESP), Botucatu, Brazil.
Mateus V de CastroHuman Genome and Stem Cell Research Center, University of São Paulo, São Paulo, Brazil.
Michel S NaslavskyHuman Genome and Stem Cell Research Center, University of São Paulo, São Paulo, Brazil.
Marilia O ScliarHuman Genome and Stem Cell Research Center, University of São Paulo, São Paulo, Brazil.
Nayane S B SilvaMolecular Genetics and Bioinformatics Laboratory, Experimental Research Unit (Unipex), School of Medicine, São Paulo State University (UNESP), Botucatu, Brazil.
Raphaela N PereiraMolecular Genetics and Bioinformatics Laboratory, Experimental Research Unit (Unipex), School of Medicine, São Paulo State University (UNESP), Botucatu, Brazil.
Viviane A O CiriacoMolecular Genetics and Bioinformatics Laboratory, Experimental Research Unit (Unipex), School of Medicine, São Paulo State University (UNESP), Botucatu, Brazil.
Camila F B CastroMolecular Genetics and Bioinformatics Laboratory, Experimental Research Unit (Unipex), School of Medicine, São Paulo State University (UNESP), Botucatu, Brazil.
Celso T Mendes-JuniorDepartamento de Química, Faculdade de Filosofa, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo, Ribeirão Preto, Brazil.
Etiele de S SilveiraPrograma de Pós-Graduação em Genética e Biologia Molecular, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil.
Iuri M de OliveiraPrograma de Pós-Graduação em Genética e Biologia Molecular, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil.
Eduardo C AntonioPrograma de Pós-Graduação em Genética e Biologia Molecular, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil.
Gustavo F VieiraPrograma de Pós-Graduação em Genética e Biologia Molecular, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil.
Diogo MeyerDepartment of Genetics and Evolutionary Biology, Biosciences Institute, University of São Paulo, São Paulo, Brazil.
Kelly NunesDepartment of Genetics and Evolutionary Biology, Biosciences Institute, University of São Paulo, São Paulo, Brazil.
Larissa R B MatosHuman Genome and Stem Cell Research Center, University of São Paulo, São Paulo, Brazil.
Monize V R SilvaHuman Genome and Stem Cell Research Center, University of São Paulo, São Paulo, Brazil.
Jaqueline Y T WangHuman Genome and Stem Cell Research Center, University of São Paulo, São Paulo, Brazil.
Joyce EspositoHuman Genome and Stem Cell Research Center, University of São Paulo, São Paulo, Brazil.
Vivian R CóriaHuman Genome and Stem Cell Research Center, University of São Paulo, São Paulo, Brazil.
Jhosiene Y MagawaDepartamento de Clínica Médica, Disciplina de Alergia e Imunologia Clínica, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Keity S SantosDepartamento de Clínica Médica, Disciplina de Alergia e Imunologia Clínica, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Edecio Cunha-NetoDepartamento de Clínica Médica, Disciplina de Alergia e Imunologia Clínica, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Jorge KalilDepartamento de Clínica Médica, Disciplina de Alergia e Imunologia Clínica, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.
Raul H BortolinDepartment of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil.
Mário Hiroyuki HirataDepartment of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil.
Luiz P Dell'AquilaPrevent Senior Institute, São Paulo, Brazil.
Alvaro Razuk-FilhoPrevent Senior Institute, São Paulo, Brazil.
Pedro B Batista-JúniorPrevent Senior Institute, São Paulo, Brazil.
Amaro N Duarte-NetoDepartment of Pathology, School of Medicine, University of Sao Paulo, Sao Paulo, Brazil.
Marisa DolhnikoffDepartment of Pathology, School of Medicine, University of Sao Paulo, Sao Paulo, Brazil.
Paulo H N SaldivaDepartment of Pathology, School of Medicine, University of Sao Paulo, Sao Paulo, Brazil.
Maria Rita Passos-BuenoHuman Genome and Stem Cell Research Center, University of São Paulo, São Paulo, Brazil.
Mayana ZatzHuman Genome and Stem Cell Research Center, University of São Paulo, São Paulo, Brazil.
Universidade de São Paulo · BRUniversidade Estadual Paulista (Unesp) · BRHospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo · BRUniversidade Federal do Rio Grande do Sul · BRUniversidade La Salle · BR

Funding

Theoretical Population Genetics SupplementR01GM075091 · NIGMS · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2006 to 2020
$4.7M
NIGMS NIH HHS R01 GM075091
6 · The paper itself

Abstract

Background: Although aging correlates with a worse prognosis for Covid-19, super elderly still unvaccinated individuals presenting mild or no symptoms have been reported worldwide. Most of the reported genetic variants responsible for increased disease susceptibility are associated with immune response, involving type I IFN immunity and modulation; Methods: SARS-CoV-2 infection was confirmed by RT-PCR test. Aiming to identify candidate genes associated with host resistance, we investigated 87 individuals older than 90 years who recovered from Covid-19 with mild symptoms or who remained asymptomatic following positive test for SARS-CoV-2 as compared to 55 individuals younger than 60 years who had a severe disease or died due to Covid-19, as well as to the general elderly population from the same city. Whole-exome sequencing and an in-depth analysis of the MHC region was performed. All samples were collected in early 2020 and before the local vaccination programs started. Results: We found that the resilient super elderly group displayed a higher frequency of some missense variants in the Conclusion: Since the pro-inflammatory basal state in the elderly may enhance the susceptibility to severe Covid-19, we hypothesized that

Indexed as

COVID-19AgedBrazilGenes, MHC Class IIHLA-A AntigensHumansMucinsSARS-CoV-2HLA-A AntigensMUC22 protein, humanMucinsCOVID-19HLAhuman leukocyte antigensimmune responsemajor histocompatibility complex (MCH)MUC22resistant genetic variantsSARS-CoV-2

Identifiers

PMID36389712
PMCPMC9641602
OpenAlexW4307372730

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.