Evidence map›Paper›PMID 36388058›Full record

ArticleJournal of mass spectrometry and advances in the clinical lab2022

Imaging mass spectrometry reveals complex lipid distributions across

Emilio S Rivera, Andy Weiss, Lukasz G Migas, Jeffrey A Freiberg, Katerina V Djambazova, Elizabeth K Neumann, Raf Van de Plas, Jeffrey M Spraggins, Eric P Skaar, Richard M Caprioli

Abstract read
In one paragraph

Article in Journal of mass spectrometry and advances in the clinical lab, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Clarifying the Dual Role ofFoods (Basel, Switzerland) · 2025
    Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. MALDI TIMS IMS Reveals Ganglioside Molecular Diversity within MurineJournal of the American Society for Mass Spectrometry · 2024
    Article
  12. Biofilm · 2024
    Review
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. How to study biofilms: technological advancements in clinical biofilm research.Frontiers in cellular and infection microbiology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Emilio S RiveraDepartment of Biochemistry, Vanderbilt University, Nashville, TN, USA.
Andy WeissDepartment of Pathology Microbiology and Immunology, Vanderbilt University, Nashville, TN, USA.
Lukasz G MigasDelft University of Technology, Delft, Netherlands.
Jeffrey A FreibergDepartment of Pathology Microbiology and Immunology, Vanderbilt University, Nashville, TN, USA.
Katerina V DjambazovaMass Spectrometry Research Center, Vanderbilt University, Nashville, TN, USA.
Elizabeth K NeumannDepartment of Biochemistry, Vanderbilt University, Nashville, TN, USA.
Raf Van de PlasMass Spectrometry Research Center, Vanderbilt University, Nashville, TN, USA.
Jeffrey M SpragginsDepartment of Biochemistry, Vanderbilt University, Nashville, TN, USA.
Eric P SkaarDepartment of Pathology Microbiology and Immunology, Vanderbilt University, Nashville, TN, USA.
Richard M CaprioliDepartment of Biochemistry, Vanderbilt University, Nashville, TN, USA.

Funding

TRAINING PROGRAM IN ENVIRONMENTAL TOXICOLOGYT32ES007028 · NIEHS · VANDERBILT UNIVERSITY · PI F PETER Guengerich, Fiona Edith Harrison · 1985 to 2026
$15.7M
Vanderbilt Infection Pathogenesis and Epidemiology Research Training ProgramT32AI007474 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KALAMS, SPYROS A · 1995 to 2025
$6.9M
Molecular mapping of microbial communities at the host-pathogen interface by multi-modal 3-dimensional imaging mass spectrometryR01AI138581 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Eric P Skaar, Jeffrey M Spraggins · 2018 to 2026
$5.2M
Elucidating the mechanisms of antibiotic tolerance in Staphylococcus aureus biofilmsF32AI169905 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI FREIBERG, JEFFREY ALEXANDER · 2022 to 2023
$148k
NIAID NIH HHS F32 AI169905NIAID NIH HHS R01 AI138581NIAID NIH HHS T32 AI007474NIEHS NIH HHS T32 ES007028
6 · The paper itself

Abstract

Introduction: Although Methods: Results: Implementation of TIMS led to a ∼ threefold increase in the number of lipid species detected. Washing biofilm samples with ammonium formate (150 mM) increased signal intensity for some bacterial lipids by as much as tenfold, with minimal disruption of the biofilm structure. MALDI TIMS IMS revealed that most lipids localize primarily to a single biofilm layer, and species from the same lipid class such as cardiolipins CL(57:0) - CL(66:0) display starkly different localizations, exhibiting between 1.5 and 6.3-fold intensity differences between layers (n = 3, p < 0.03). No horizontal layers were observed within biofilms grown anaerobically, and lipids were distributed homogenously. Conclusions: High spatial resolution analysis of

Indexed as

BiofilmsCASI, continuous accumulation of selected ionsCFU, colony forming unitsCL, CardiolipinCMC, carboxymethylcelluloseDAN, 1′,5′-DiaminonaphthaleneDAPI, 4′,6-diamidino-2-phenylindoleDGDG, digalactosyldiacylglycerolDG, diacylglycerolDHA, 2′,5′-DihydroxyacetophenoneDsRed, red fluorescent protein from DiscosomaEFG, electric field gradientFWHM, full-width half maxGFP, green fluorescent proteinImaging Mass SpectrometryIMS, imaging mass spectrometryITO, indium-tin oxideLipidsL-PG, lysyl-phosphatidylglycerolMALDI, matrix-assisted laser desorption/ionizationOCT, optimal cutting temperaturePC, phosphatidylcholinePG, phosphatidylglycerolPIP, phosphatidylinositol phosphateS/N, Signal-to-noiseTIC, total ion currentTIMS, trapped ion mobility spectrometryTrapped Ion MobilityTSA, tryptic soy agarTSB, tryptic soy brothXIM, extracted ion mobilogram

Identifiers

PMID36388058
PMCPMC9641601

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.