Evidence map›Paper›PMID 36387102›Full record

ArticleFrontiers in oncology2022

Development of genomic instability-associated long non-coding RNA signature: A prognostic risk model of clear cell renal cell carcinoma.

Dongfang Jiang, Tiange Wu, Naipeng Shi, Yong Shan, Jinfeng Wang, Hua Jiang, Yuqing Wu, Mengxue Wang, Jian Li, Hui Liu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 59% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 1 country.

Dongfang JiangDepartment of Urology, Danyang People's Hospital, Danyang, China.
Tiange WuDepartment of Clinical Medicine, Medical School of Southeast University, Nanjing, China.
Naipeng ShiDepartment of Clinical Medicine, Medical School of Southeast University, Nanjing, China.
Yong ShanDepartment of Urology, The Second People's Hospital of Taizhou, Taizhou, China.
Jinfeng WangDepartment of Urology, Yancheng Third People's Hospital, Yancheng, China.
Hua JiangDepartment of Clinical Medicine, Medical School of Southeast University, Nanjing, China.
Yuqing WuDepartment of Clinical Medicine, Medical School of Southeast University, Nanjing, China.
Mengxue WangDepartment of Clinical Medicine, Medical School of Southeast University, Nanjing, China.
Jian LiDepartment of Urology, Jinhu County People's Hospital, Huaian, China.
Hui LiuDepartment of Urology, Binhai County People's Hospital, Yancheng, China.
Ming ChenDepartment of Urology, Zhongda Hospital Affiliated to Southeast University, Nanjing, China.
Southeast University · CNZhongda Hospital Southeast University · CNBinzhou People's Hospital · CNFuyang City People's Hospital · CNHonghu People’s Hospital · CNTaizhou Second People's Hospital · CNYancheng Third People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Renal clear cell carcinoma (ccRCC) is the most lethal of all pathological subtypes of renal cell carcinoma (RCC). Genomic instability was recently reported to be related to the occurrence and development of kidney cancer. The biological roles of long non-coding RNAs (lncRNAs) in tumorigenesis have been increasingly valued, and various lncRNAs were found to be oncogenes or cancer suppressors. Herein, we identified a novel genomic instability-associated lncRNA (GILncs) model for ccRCC patients to predict the overall survival (OS). Methods: The Cancer Genome Atlas (TCGA) database was utilized to obtain full transcriptome data, somatic mutation profiles, and clinical characteristics. The differentially expressed lncRNAs between the genome-unstable-like group (GU) and the genome-stable-like group (GS) were defined as GILncs, with |logFC| > 1 and an adjusted Results: Forty-six lncRNAs were identified as GILncs. LINC00460, AL139351.1, and AC156455.1 were employed for GILncSig calculation based on the results of Cox analysis. GILncSig was confirmed as an independent predictor for OS of ccRCC patients. Additionally, it presented a higher efficiency and accuracy than other RCC prognostic models reported before. Conclusion: GILncSig score was qualified as a critical indicator, independent of other clinical factors, for prognostic prediction of ccRCC patients.

Indexed as

bioinformaticscell renal cell carcinomalong non-coding RNAprognosisTCGA

Identifiers

PMID36387102
PMCPMC9651086
OpenAlexW4306842404

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.