Evidence map›Paper›PMID 36386651›Full record

ArticleFrontiers in microbiology2022

Jun Xu, Xiaojun Chen, Xia Zheng

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jun XuIntensive Care Unit, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, China.
Xiaojun ChenReal Doctor AI Research Centre, Zhejiang University, Hangzhou, China.
Xia ZhengIntensive Care Unit, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Methods: A retrospective study of ICU patients with ABCBSI was performed in China from 2009 to 2020. Patients were stratified into two groups: those that suffered from fulminant sepsis and died within 48 h, and those that survived for more than 48 h. The clinical score systems and ML models with Shapley additive explanation (SHAP) were used to develop the prediction models. The ML model was internally validated with five-fold cross-validation, and its performance was assessed using seven typical evaluation indices. The top 20 features ranked by the SHAP scores were also calculated. Results: Among 188 ICU patients with ABCBSI, 53 were assigned to the non-survival group and 135 to the survival group. The XGBoost model exhibited the greatest area under the receiver operating characteristic curve (AUC), which outperformed other models (logistic regression, AUC = 0.914; support vector machine, AUC = 0.895; random forest, AUC = 0.972; and naive Bayesian, AUC = 0.908) and clinical scores (Acute Physiology and Chronic Health Evaluation II (APACHE II), AUC = 0.855; Sequential Organ Failure Assessment (SOFA), AUC = 0.837). It also had a sensitivity of 0.868, a specificity of 0.970, an accuracy of 0.941, a positive predictive value of 0.920, a negative predictive value of 0.949, and an F1 score of 0.893. As well as identifying the top 12 different important predictors that contribute to early mortality, it also assessed their quantitative contribution and noteworthy thresholds. Conclusion: Based on the XGBoost model, early mortality in ABCBSI is estimated to be more reliable than other models and clinical scores. The 12 most important features with corresponding thresholds were identified and more importantly, the SHAP method can be used to interpret this predictive model and support individual patient treatment strategies.

Indexed as

Acinetobacter baumannii complex-caused bloodstream infectionfulminant sepsismachine learning modelShapley additive explanationtreatment strategies

Identifiers

PMID36386651
PMCPMC9663990

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.