Evidence map›Paper›PMID 36384962›Full record

ArticleRNA (New York, N.Y.)2023

Distinct Gag interaction properties of HIV-1 RNA 5' leader conformers reveal a mechanism for dimeric genome selection.

Xin Yang, Yong Liu, Wen Cui, Mengmeng Liu, Wei Wang

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xin Yang *Institute of Life Sciences, Chongqing Medical University, Chongqing 400016, China.
Yong Liu *Institute of Life Sciences, Chongqing Medical University, Chongqing 400016, China.
Wen CuiInstitute of Life Sciences, Chongqing Medical University, Chongqing 400016, China.
Mengmeng LiuOffice of Research Administration, Chongqing Medical University, Chongqing 400016, China.
Wei WangInstitute of Life Sciences, Chongqing Medical University, Chongqing 400016, China.ORCID 0000-0002-2870-0733

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During HIV-1 assembly, two copies of viral genomic RNAs (gRNAs) are selectively packaged into new viral particles. This process is mediated by specific interactions between HIV-1 Gag and the packaging signals at the 5' leader (5'L) of viral gRNA. 5'L is able to adopt different conformations, which promotes either gRNA dimerization and packaging or Gag translation. Dimerization and packaging are coupled. Whether the selective packaging of the gRNA dimer is due to favorable interactions between Gag and 5'L in the packaging conformation is not known. Here, using RNAs mimicking the two 5'L conformers, we show that the 5'L conformation dramatically affects Gag-RNA interactions. Compared to the RNA in the translation conformation (5'L

Indexed as

HIV-1RNA, ViralViral ProteinsGenome, ViralNucleic Acid ConformationProtein PrecursorsVirionVirus Assemblyp55 gag precursor protein, Human immunodeficiency virus 1Protein PrecursorsRNA, ViralViral Proteins5′ leader conformationGag–RNA interactionHIV-1RNA packaging

Identifiers

PMID36384962
PMCPMC9891258

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.