Evidence map›Paper›PMID 36384889›Full record

ArticleAging2022

Molecular subtypes identified by pyroptosis-related genes are associated with tumor microenvironment cell infiltration in colon cancer.

Yiting Ling, Yinda Wang, Chenxi Cao, Lianzhong Feng, Binzhong Zhang, Senjuan Li

Open access · hybridAbstract read
In one paragraph

Article in Aging, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yiting LingDepartment of Anorectal Surgery, Jiaxing Second Hospital, Jiaxing 314000, Zhejiang, P.R. China.
Yinda WangDepartment of Gastrointestinal Surgery, Jiaxing Second Hospital, Jiaxing 314000, Zhejiang, P.R. China.
Chenxi CaoDepartment of Anorectal Surgery, Jiaxing Second Hospital, Jiaxing 314000, Zhejiang, P.R. China.
Lianzhong FengDepartment of Gastrointestinal Surgery, Jiaxing Second Hospital, Jiaxing 314000, Zhejiang, P.R. China.
Binzhong ZhangDepartment of Gastrointestinal Surgery, Jiaxing Second Hospital, Jiaxing 314000, Zhejiang, P.R. China.
Senjuan LiDepartment of Anorectal Surgery, Jiaxing Second Hospital, Jiaxing 314000, Zhejiang, P.R. China.
First Hospital of Jiaxing · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The important role of pyroptosis in tumor progression has been well characterized in recent years. However, little is known about the impact of tumor pyroptosis characteristics on patient prognosis and tumor microenvironment (TME) as well as efficacy of immunotherapy. In this study, we successfully classified colon cancer samples into three pyroptosis characterizations with different prognosis and TME cell infiltration patterns based on the expression of pyroptosis-related genes. Cluster 2, with the characterizations of immunosuppression, was classified as immune-desert cell infiltration patterns. Cluster 3, with the patterns of immune-inflamed cell infiltration, had the feature of an activated innate and adaptive immunity and significant prolonged survival. The activation of stromal pathways including EMT, angiogenesis and TGF-β in cluster 1 may mediate the impaired immune penetration of this cluster, which was classified as immune-excluded cell infiltration patterns. Our results demonstrated the PyroSig signature was a robust and independent biomarker for predicting patient prognosis. Patients with low PyroSig signature was confirmed to be correlated with treatment advantages and significant prolonged survival in two anti-checkpoint immunotherapy cohorts. This study identified three pyroptosis-related subtypes with distinct molecular features, clinical and microenvironment cell infiltration patterns in colon cancer, which could promote individualized immunotherapy for colon cancer.

Indexed as

Colonic NeoplasmsTumor MicroenvironmentHumansImmunosuppression TherapyImmunotherapyPrognosisPyroptosisimmune responseimmunotherapyprognosispyroptosistumor microenvironment

Identifiers

PMID36384889
PMCPMC9740378
OpenAlexW4309246509

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.