Evidence map›Paper›PMID 36384460›Full record

ArticleBMC ophthalmology2022

Case report: novel PCDH15 variant causes usher syndrome type 1F with congenital hearing loss and syndromic retinitis pigmentosa.

Nelson Chen, Hane Lee, Angela H Kim, Pei-Kang Liu, Eugene Yu-Chuan Kang, Yun-Ju Tseng, Go Hun Seo, Rin Khang, Laura Liu, Kuan-Jen Chen and 3 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC ophthalmology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. The Role of Visual Electrophysiology in Systemic Hereditary Syndromes.International journal of molecular sciences · 2025
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Nelson ChenDepartment of Ophthalmology, Edward S. Harkness Eye Institute, Columbia University Medical Center, 635 West 165th Street, New York, NY, 10032, USA.
Hane LeeDivision of Medical Genetics, 3billion, Inc., Seoul, South Korea.
Angela H KimDepartment of Ophthalmology, Edward S. Harkness Eye Institute, Columbia University Medical Center, 635 West 165th Street, New York, NY, 10032, USA.
Pei-Kang LiuDepartment of Ophthalmology, Edward S. Harkness Eye Institute, Columbia University Medical Center, 635 West 165th Street, New York, NY, 10032, USA.
Eugene Yu-Chuan KangDepartment of Ophthalmology, Chang Gung Memorial Hospital, Linkou Medical Center, Taoyuan, Taiwan.
Yun-Ju TsengDepartment of Ophthalmology, Edward S. Harkness Eye Institute, Columbia University Medical Center, 635 West 165th Street, New York, NY, 10032, USA.
Go Hun SeoDivision of Medical Genetics, 3billion, Inc., Seoul, South Korea.
Rin KhangDivision of Medical Genetics, 3billion, Inc., Seoul, South Korea.
Laura LiuDepartment of Ophthalmology, Chang Gung Memorial Hospital, Linkou Medical Center, Taoyuan, Taiwan.
Kuan-Jen ChenDepartment of Ophthalmology, Chang Gung Memorial Hospital, Linkou Medical Center, Taoyuan, Taiwan.
We-Chi WuDepartment of Ophthalmology, Chang Gung Memorial Hospital, Linkou Medical Center, Taoyuan, Taiwan.
Meng-Chang HsiaoDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, NY, USA.
Nan-Kai WangDepartment of Ophthalmology, Edward S. Harkness Eye Institute, Columbia University Medical Center, 635 West 165th Street, New York, NY, 10032, USA. wang.nankai@gmail.com.ORCID http://orcid.org/0000-0002-6277-9879
Chang Gung University · TWColumbia University Irving Medical Center · USNational Sun Yat-sen University · TWQueen's University · CAState University of New York · US

Funding

Instrumentation, Fabrication, and Design CoreP30EY019007 · NEI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Xin Zhang · 2010 to 2026
$12.9M
Reprogramming the metabolome to overcome the genetic heterogeneity in retinitis pigmentosaR01EY031354 · NEI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WANG, NAN-KAI · 2020 to 2024
$2.0M
NEI NIH HHS P30 EY019007NEI NIH HHS R01 EY031354
6 · The paper itself

Abstract

backgroundUsher syndrome (USH) is an autosomal recessive disorder primarily responsible for deaf-blindness. Patients with subtype Usher syndrome type 1 (USH1) typically experience congenital sensorineural hearing loss, abnormal vestibular function, and retinitis pigmentosa (RP). Here we present a case of Usher syndrome type 1F (USH1F) with a novel homozygous variant in the calcium-dependent cell-cell adhesion protocadherin-15 (PCDH15) gene. CASE PRESENTATION: Ophthalmic examinations were evaluated over a course of 10 years and the disease-causing variant was identified by whole exome sequencing (WES). Initial and follow-up examination of color fundus photos after 10 years revealed an increase in bone spicule pigment deposits in both eyes. A parafoveal hyper-AF ring in both eyes was shown in fundus autofluorescence (FAF) with a progressive diameter-wise constriction observed over 8 years. Outer nuclear layer (ONL) loss was observed in parafoveal and perifoveal regions of both eyes on spectral domain-optical coherence tomography (SD-OCT). Full-field electroretinography (ffERG) showed extinguished global retinal function. WES identified a novel two-base-pair deletion, c.60_61del (p.Phe21Ter), in the PCDH15 gene, confirming the diagnosis of USH1F.

conclusionsWe report a novel homozygous PCDH15 pathogenic variant expected to lead to nonsense-mediated decay (NMD) of PCDH15 mRNA. The patient exhibits a loss of function with USH1F, experiencing congenital hearing loss and syndromic RP.

Indexed as

Retinitis PigmentosaUsher SyndromesCadherinsHumansRetinaCadherinsCase reportCongenital hearing lossLoss of functionNonsense-mediated decayPCDH15Protocadherin-15Syndromic retinitis pigmentosaUsher syndrome type 1F (USH1F)

Identifiers

PMID36384460
PMCPMC9670441
OpenAlexW4309321954

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.