Evidence map›Paper›PMID 36383678›Full record

ArticleScience advances2022

Discovery of integrons in Archaea: Platforms for cross-domain gene transfer.

Timothy M Ghaly, Sasha G Tetu, Anahit Penesyan, Qin Qi, Vaheesan Rajabal, Michael R Gillings

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Timothy M GhalySchool of Natural Sciences, Macquarie University, Sydney, New South Wales 2109, Australia.ORCID 0000-0002-5162-4054
Sasha G TetuSchool of Natural Sciences, Macquarie University, Sydney, New South Wales 2109, Australia.ORCID 0000-0002-8943-3499
Anahit PenesyanSchool of Natural Sciences, Macquarie University, Sydney, New South Wales 2109, Australia.ORCID 0000-0002-2502-0740
Qin QiSchool of Natural Sciences, Macquarie University, Sydney, New South Wales 2109, Australia.ORCID 0000-0002-6148-2416
Vaheesan RajabalSchool of Natural Sciences, Macquarie University, Sydney, New South Wales 2109, Australia.ORCID 0000-0002-6517-5931
Michael R GillingsSchool of Natural Sciences, Macquarie University, Sydney, New South Wales 2109, Australia.ORCID 0000-0002-4043-4351
ARC Centre of Excellence in Synthetic Biology · AUMacquarie University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Horizontal gene transfer between different domains of life is increasingly being recognized as an important evolutionary driver, with the potential to increase the pace of biochemical innovation and environmental adaptation. However, the mechanisms underlying the recruitment of exogenous genes from foreign domains are mostly unknown. Integrons are a family of genetic elements that facilitate this process within Bacteria. However, they have not been reported outside Bacteria, and thus their potential role in cross-domain gene transfer has not been investigated. Here, we discover that integrons are also present in 75 archaeal metagenome-assembled genomes from nine phyla, and are particularly enriched among Asgard archaea. Furthermore, we provide experimental evidence that integrons can facilitate the recruitment of archaeal genes by bacteria. Our findings establish a previously unknown mechanism of cross-domain gene transfer whereby bacteria can incorporate archaeal genes from their surrounding environment via integron activity. These findings have important implications for prokaryotic ecology and evolution.

Identifiers

PMID36383678
PMCPMC9668308
OpenAlexW4309244652

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.