Evidence map›Paper›PMID 36383671›Full record

ArticleScience advances2022

Three-dimensional imaging and analysis of pathological tissue samples with de novo generation of citrate-based fluorophores.

Jinyoung Pac, Dong-Jun Koo, Hyeongjun Cho, Dongwook Jung, Min-Ha Choi, Yunjung Choi, Bohyun Kim, Ji-Ung Park, Sung-Yon Kim, Yan Lee

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jinyoung PacDepartment of Chemistry, Seoul National University, Seoul 08826, South Korea.ORCID 0000-0001-5918-755X
Dong-Jun KooInstitute of Molecular Biology and Genetics, Seoul National University, Seoul 08826, South Korea.ORCID 0000-0002-0596-1252
Hyeongjun ChoDepartment of Chemistry, Seoul National University, Seoul 08826, South Korea.
Dongwook JungDepartment of Chemistry, Seoul National University, Seoul 08826, South Korea.
Min-Ha ChoiDepartment of Plastic and Reconstructive Surgery, Seoul National University Boramae Hospital, Seoul National University College of Medicine, 5 Gil 20, Boramae Road, Dongjak-Gu, Seoul 07061, South Korea.ORCID 0000-0002-9251-4732
Yunjung ChoiDepartment of Chemistry, Seoul National University, Seoul 08826, South Korea.ORCID 0000-0003-4827-5399
Bohyun KimDepartment of Pathology, Konkuk University Medical Center, Konkuk University School of Medicine, Seoul, South Korea.ORCID 0000-0002-4097-4710
Ji-Ung ParkDepartment of Plastic and Reconstructive Surgery, Seoul National University Boramae Hospital, Seoul National University College of Medicine, 5 Gil 20, Boramae Road, Dongjak-Gu, Seoul 07061, South Korea.ORCID 0000-0002-6403-4918
Sung-Yon KimDepartment of Chemistry, Seoul National University, Seoul 08826, South Korea.ORCID 0000-0003-0791-7308
Yan LeeDepartment of Chemistry, Seoul National University, Seoul 08826, South Korea.ORCID 0000-0003-2498-1301
Seoul National University · KRSNUH SMG-SNU Boramae Medical Center · KRKonkuk University Medical Center · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two-dimensional (2D) histopathology based on the observation of thin tissue slides is the current paradigm in diagnosis and prognosis. However, labeling strategies in conventional histopathology are limited in compatibility with 3D imaging combined with tissue clearing techniques. Here, we present a rapid and efficient volumetric imaging technique of pathological tissues called 3D tissue imaging through de novo formation of fluorophores, or 3DNFC, which is the integration of citrate-based fluorogenic reaction DNFC and tissue clearing techniques. 3DNFC markedly increases the fluorescence intensity of tissues by generating fluorophores on nonfluorescent amino-terminal cysteine and visualizes the 3D structure of the tissues to provide their anatomical morphology and volumetric information. Furthermore, the application of 3DNFC to pathological tissue achieves the 3D reconstruction for the unbiased analysis of diverse features of the disorders in their natural context. We suggest that 3DNFC is a promising volumetric imaging method for the prognosis and diagnosis of pathological tissues.

Identifiers

PMID36383671
PMCPMC9668299
OpenAlexW4309246798

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.