Evidence map›Paper›PMID 36382932›Full record

ArticleGenetics and molecular biology2022

Association of PSORS1C3, CARD14 and TLR4 genotypes and haplotypes with psoriasis susceptibility.

Nguyen Thi Thuy Linh, Nguyen Hoang Giang, Nguyen Thi Kim Lien, Bui Kieu Trang, Do Thi Trang, Nguyen Thy Ngoc, Vu Xuan Nghia, Le Tra My, Can Van Mao, Nguyen Huy Hoang and 1 more

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Article in Genetics and molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Nguyen Thi Thuy LinhUniversity of Science and Technology, Vietnam Academy of Science and Technology, Ha Noi, Vietnam.
Nguyen Hoang GiangInstitute of Genome Research, Vietnam Academy of Science and Technology, Ha Noi, Vietnam.
Nguyen Thi Kim LienInstitute of Genome Research, Vietnam Academy of Science and Technology, Ha Noi, Vietnam.
Bui Kieu TrangInstitute of Genome Research, Vietnam Academy of Science and Technology, Ha Noi, Vietnam.
Do Thi TrangInstitute of Genome Research, Vietnam Academy of Science and Technology, Ha Noi, Vietnam.
Nguyen Thy NgocUniversity of Science and Technology of Hanoi, Vietnam Academy of Science and Technology, Ha Noi, Vietnam.
Vu Xuan Nghia108 Military Central Hospital, Hanoi, Vietnam.
Le Tra MyInstitute of Genome Research, Vietnam Academy of Science and Technology, Ha Noi, Vietnam.
Can Van MaoVietnam Military Medical University, Department of Pathophysiology, Ha Dong, Hanoi, Vietnam.
Nguyen Huy HoangUniversity of Science and Technology, Vietnam Academy of Science and Technology, Ha Noi, Vietnam.
Nguyen Thi XuanUniversity of Science and Technology, Vietnam Academy of Science and Technology, Ha Noi, Vietnam.ORCID http://orcid.org/0000-0003-3494-5136
Malaysia Genome Institute · MYVietnam Academy of Science and Technology · VN108 Military Central Hospital · VNVietnam Military Medical University · VN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Psoriasis is a common chronic, immune-mediated inflammatory disease of the skin. PSORS1C3 is a non-protein coding gene, of which the RNA transcript is found in psoriatic patients. CARD14 is mainly expressed in epidermal keratinocytes. TLR4 is a transmembrane protein to recognize microbial antigens. Our study aimed to assess the relationship among PSORS1C3, CARD14 and TLR4 polymorphisms, inflammatory expression and psoriasis susceptibility. To the end, 71 patients with psoriasis and 46 healthy individuals with the well-characterized clinical profiles were enrolled. Gene polymorphisms were determined by Sanger DNA sequencing and secretion of cytokines by ELISA. As a result, genetic analysis of PSORS1C3 gene identified nine SNPs and three haplotype blocks. Sequencing of the CARD14 gene determined eight SNPs and one haplotype block. Sequencing of TLR4 gene identified nine SNPs, in which a SNP rs1018673641 was found to exert deleterious effect. The linkage disequilibrium analysis showed that seven variants in PSORS1C3 gene and three SNPs in CARD14 gene were in tightly linked. More importantly, a significant association between IL-6 level and rs1018673641 AT genotype in TLR4 gene was detected in psoriatic patients. In conclusion, the PSORS1C3, CARD14 and TLR4 polymorphisms and haplotypes may be correlated with risk of suffering psoriasis and the IL-6-mediated chronic inflammation in psoriasis could be partially regulated by the TLR4 functional variant.

Identifiers

PMID36382932
PMCPMC9667706
OpenAlexW4309437837

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.