Evidence map›Paper›PMID 36382182›Full record

ReviewComputational and structural biotechnology journal2022

Demystifying extrachromosomal DNA circles: Categories, biogenesis, and cancer therapeutics.

Manrong Wu, Kunal Rai

Abstract readReview
In one paragraph

Review in Computational and structural biotechnology journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Manrong WuGraduate Program in Quantitative and Computational Biosciences, Baylor College of Medicine, Houston, TX, USA.
Kunal RaiGraduate Program in Quantitative and Computational Biosciences, Baylor College of Medicine, Houston, TX, USA.

Funding

UCHL5 as a regulator and therapeutic target in metastatic melanomaR01CA245395 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RAI, KUNAL · 2020 to 2024
$2.0M
Role of UBR7, a novel H2BK120 E3 ubiquitin ligase, in suppression of breast cancerR01CA226269 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RAI, KUNAL · 2020 to 2024
$1.8M
Role of KMT2D and aberrant enhancers in modulating tumor microenvironment in melanomaR01CA222214 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RAI, KUNAL · 2018 to 2022
$1.8M
Contribution of Epigenome to PRKCI-Driven High-Grade Serous Ovarian CancerR21CA256278 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RAI, KUNAL · 2021 to 2021
$417k
NCI NIH HHS R01 CA222214NCI NIH HHS R01 CA226269NCI NIH HHS R01 CA245395NCI NIH HHS R21 CA256278
6 · The paper itself

Abstract

Since the advent of sequencing technologies in the 1990s, researchers have focused on the association between aberrations in chromosomal DNA and disease. However, not all forms of the DNA are linear and chromosomal. Extrachromosomal circular DNAs (eccDNAs) are double-stranded, closed-circled DNA constructs free from the chromosome that reside in the nuclei. Although widely overlooked, the eccDNAs have recently gained attention for their potential roles in physiological response, intratumoral heterogeneity and cancer therapeutics. In this review, we summarize the history, classifications, biogenesis, and highlight recent progresses on the emerging topic of eccDNAs and comment on their potential application as biomarkers in clinical settings.

Indexed as

BiogenesisCancer therapeuticseccDNA classificationeccDNAsPhysiological response

Identifiers

PMID36382182
PMCPMC9647416

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.