Evidence map›Paper›PMID 36379956›Full record

ArticleNature communications2022

Specification of female germline by microRNA orchestrated auxin signaling in Arabidopsis.

Jian Huang, Lei Zhao, Shikha Malik, Benjamin R Gentile, Va Xiong, Tzahi Arazi, Heather A Owen, Jiří Friml, Dazhong Zhao

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. VPS13 has an important role in female germline development in Arabidopsis.The Plant journal : for cell and molecular biology · 2026
    Article
  6. Article
  7. Article
  8. Cytological and genetic analyses of the seed number per silique locus BnSNSC09 in Brassica napus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  9. Review
  10. Review
  11. Auxin Orchestrates Germ Cell Specification inInternational journal of molecular sciences · 2025
    Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Revisiting the female germline cell development.Frontiers in plant science · 2024
    Review
  17. OsmiRNA5488 Regulates the Development of Embryo Sacs and TargetsInternational journal of molecular sciences · 2023
    Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jian HuangDepartment of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, 53211, USA.
Lei ZhaoDepartment of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, 53211, USA.
Shikha MalikDepartment of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, 53211, USA.
Benjamin R GentileDepartment of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, 53211, USA.
Va XiongDepartment of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, 53211, USA.
Tzahi AraziInstitute of Plant Sciences, ARO, Volcani Center, HaMaccabbim Road 68, 7505101, Rishon LeZion, Israel.
Heather A OwenDepartment of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, 53211, USA.
Jiří FrimlInstitute of Science and Technology (IST) Austria, 3400, Klosterneuburg, Austria.ORCID 0000-0002-8302-7596
Dazhong ZhaoDepartment of Biological Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI, 53211, USA. dzhao@uwm.edu.ORCID 0000-0002-2045-0717

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Germline determination is essential for species survival and evolution in multicellular organisms. In most flowering plants, formation of the female germline is initiated with specification of one megaspore mother cell (MMC) in each ovule; however, the molecular mechanism underlying this key event remains unclear. Here we report that spatially restricted auxin signaling promotes MMC fate in Arabidopsis. Our results show that the microRNA160 (miR160) targeted gene ARF17 (AUXIN RESPONSE FACTOR17) is required for promoting MMC specification by genetically interacting with the SPL/NZZ (SPOROCYTELESS/NOZZLE) gene. Alterations of auxin signaling cause formation of supernumerary MMCs in an ARF17- and SPL/NZZ-dependent manner. Furthermore, miR160 and ARF17 are indispensable for attaining a normal auxin maximum at the ovule apex via modulating the expression domain of PIN1 (PIN-FORMED1) auxin transporter. Our findings elucidate the mechanism by which auxin signaling promotes the acquisition of female germline cell fate in plants.

Indexed as

ArabidopsisArabidopsis ProteinsMicroRNAsGene Expression Regulation, PlantGerm CellsIndoleacetic AcidsTranscription FactorsArabidopsis ProteinsARF17 protein, ArabidopsisIndoleacetic AcidsMicroRNAsTranscription Factors

Identifiers

PMID36379956
PMCPMC9666636

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.